Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 ELMO2-201ENST00000290246 3669 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
MTHFRP42898 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC13.04□□□□□ -0.32
MTHFRP42898 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC13.04□□□□□ -0.32
MTHFRP42898 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC13.04□□□□□ -0.32
MTHFRP42898 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
MTHFRP42898 HIST1H4C-201ENST00000377803 435 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
MTHFRP42898 IGLV4-60-201ENST00000390284 362 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
MTHFRP42898 SEC14L2-201ENST00000402592 1229 ntTSL 2 BASIC13.04□□□□□ -0.32
MTHFRP42898 CTF2P-201ENST00000412003 604 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 PGC-204ENST00000425343 1152 ntTSL 2 BASIC13.04□□□□□ -0.32
MTHFRP42898 HNRNPA1P8-201ENST00000436090 951 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 Z93242.2-201ENST00000445666 394 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 SOX2-OT-201ENST00000460739 609 ntTSL 4 BASIC13.04□□□□□ -0.32
MTHFRP42898 RN7SL304P-201ENST00000488028 301 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 RN7SL454P-201ENST00000492744 243 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 AC022447.7-201ENST00000509629 435 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 IGHV3-60-201ENST00000521678 354 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 AC104371.1-201ENST00000522077 797 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 AP001922.3-201ENST00000524768 842 ntTSL 3 BASIC13.04□□□□□ -0.32
MTHFRP42898 OR7E126P-201ENST00000526217 888 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 AC068987.2-201ENST00000565518 896 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 LINC00663-207ENST00000590092 1023 ntTSL 5 BASIC13.04□□□□□ -0.32
MTHFRP42898 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC13.04□□□□□ -0.32
MTHFRP42898 LINC00694-202ENST00000634610 769 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
MTHFRP42898 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 AC092028.1-202ENST00000641483 3547 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 AC092028.1-201ENST00000641781 3540 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC13.04□□□□□ -0.32
MTHFRP42898 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MTHFRP42898 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC13.04□□□□□ -0.32
MTHFRP42898 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC13.04□□□□□ -0.32
MTHFRP42898 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 TUBAP-201ENST00000425085 1352 ntBASIC13.04□□□□□ -0.32
MTHFRP42898 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.04□□□□□ -0.32
MTHFRP42898 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
MTHFRP42898 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.04□□□□□ -0.32
MTHFRP42898 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 ENO4-203ENST00000409522 1840 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC13.04□□□□□ -0.32
MTHFRP42898 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MTHFRP42898 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
MTHFRP42898 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC13.03□□□□□ -0.32
MTHFRP42898 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC13.03□□□□□ -0.32
MTHFRP42898 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC13.03□□□□□ -0.32
MTHFRP42898 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 SMUG1-AS1-201ENST00000634796 1734 ntTSL 5 BASIC13.03□□□□□ -0.32
MTHFRP42898 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
MTHFRP42898 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
MTHFRP42898 AC211485.1-201ENST00000417100 1107 ntBASIC13.03□□□□□ -0.32
MTHFRP42898 TRBV22-1-201ENST00000424543 337 ntBASIC13.03□□□□□ -0.32
MTHFRP42898 AL590068.2-201ENST00000426067 378 ntTSL 3 BASIC13.03□□□□□ -0.32
MTHFRP42898 AC011890.1-201ENST00000427955 303 ntBASIC13.03□□□□□ -0.32
MTHFRP42898 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC13.03□□□□□ -0.32
MTHFRP42898 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC13.03□□□□□ -0.32
MTHFRP42898 AL669970.2-201ENST00000446184 280 ntTSL 3 BASIC13.03□□□□□ -0.32
MTHFRP42898 AC005220.1-201ENST00000450473 884 ntTSL 5 BASIC13.03□□□□□ -0.32
MTHFRP42898 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 AL139807.1-201ENST00000500636 704 ntTSL 3 BASIC13.03□□□□□ -0.32
MTHFRP42898 GFRA2-203ENST00000517892 1176 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 AC023078.7-201ENST00000532712 961 ntBASIC13.03□□□□□ -0.32
MTHFRP42898 AC009654.1-201ENST00000560503 757 ntTSL 3 BASIC13.03□□□□□ -0.32
MTHFRP42898 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
MTHFRP42898 MIR6750-201ENST00000617817 75 ntBASIC13.03□□□□□ -0.32
MTHFRP42898 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC13.03□□□□□ -0.32
MTHFRP42898 PRSS1-207ENST00000619214 787 ntTSL 5 BASIC13.03□□□□□ -0.32
MTHFRP42898 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.03□□□□□ -0.32
MTHFRP42898 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC13.03□□□□□ -0.32
MTHFRP42898 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 COQ10A-203ENST00000546544 1369 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.03□□□□□ -0.32
MTHFRP42898 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC13.03□□□□□ -0.32
MTHFRP42898 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC13.03□□□□□ -0.32
MTHFRP42898 AC079880.1-201ENST00000603040 2046 ntBASIC13.03□□□□□ -0.32
MTHFRP42898 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MTHFRP42898 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
MTHFRP42898 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
MTHFRP42898 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.02□□□□□ -0.32
MTHFRP42898 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MTHFRP42898 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MTHFRP42898 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms