Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
SCN2BO60939 NSA2-201ENST00000296802 1199 ntTSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 KANK1P1-201ENST00000400619 1234 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC11.87□□□□□ -0.51
SCN2BO60939 FXNP2-201ENST00000411625 547 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 AP001331.1-201ENST00000413008 1015 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC11.87□□□□□ -0.51
SCN2BO60939 MPRIPP1-201ENST00000452433 1089 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
SCN2BO60939 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC11.87□□□□□ -0.51
SCN2BO60939 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 SAP30L-AS1-202ENST00000519727 396 ntTSL 3 BASIC11.87□□□□□ -0.51
SCN2BO60939 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC11.87□□□□□ -0.51
SCN2BO60939 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 ZNF576-204ENST00000528387 859 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
SCN2BO60939 MIR4722-201ENST00000578292 60 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 MIR4746-201ENST00000579802 71 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 AC245884.9-201ENST00000596631 483 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC11.87□□□□□ -0.51
SCN2BO60939 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 AC006158.1-201ENST00000610661 249 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 LRG1-201ENST00000306390 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 AC080112.4-201ENST00000623156 2491 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 AP4S1-205ENST00000554345 1491 ntTSL 3 BASIC11.87□□□□□ -0.51
SCN2BO60939 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 PPP1R26P1-201ENST00000474415 3613 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 CD1E-208ENST00000368163 1678 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 A2M-AS1-201ENST00000499762 2192 ntTSL 2 BASIC11.86□□□□□ -0.51
SCN2BO60939 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 AL807752.1-201ENST00000395082 1322 ntBASIC11.86□□□□□ -0.51
SCN2BO60939 UBE2G1-201ENST00000396981 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 AL627309.3-201ENST00000495576 1319 ntTSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 IGSF3-202ENST00000369483 7326 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 GRAMD1B-201ENST00000322282 2571 ntTSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 AC025271.4-201ENST00000621477 1726 ntBASIC11.86□□□□□ -0.51
SCN2BO60939 CELF2-210ENST00000631816 1803 ntTSL 2 BASIC11.86□□□□□ -0.51
SCN2BO60939 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 CFAP36-202ENST00000349456 2048 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 DUXAP8-202ENST00000413768 2102 ntTSL 2 BASIC11.86□□□□□ -0.51
SCN2BO60939 ESPNL-206ENST00000612395 3673 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC11.86□□□□□ -0.51
SCN2BO60939 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 ZNF544-208ENST00000596825 3516 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SCN2BO60939 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC11.86□□□□□ -0.51
SCN2BO60939 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 HNRNPA1P25-201ENST00000422644 937 ntBASIC11.86□□□□□ -0.51
SCN2BO60939 BCAS2P2-201ENST00000425064 674 ntBASIC11.86□□□□□ -0.51
SCN2BO60939 PGC-204ENST00000425343 1152 ntTSL 2 BASIC11.86□□□□□ -0.51
SCN2BO60939 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC11.86□□□□□ -0.51
SCN2BO60939 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCN2BO60939 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC11.86□□□□□ -0.51
SCN2BO60939 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SCN2BO60939 LINC02105-201ENST00000504552 1003 ntTSL 3 BASIC11.86□□□□□ -0.51
SCN2BO60939 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC11.86□□□□□ -0.51
SCN2BO60939 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC11.86□□□□□ -0.51
SCN2BO60939 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC11.86□□□□□ -0.51
SCN2BO60939 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC11.86□□□□□ -0.51
SCN2BO60939 MIR5572-201ENST00000583188 137 ntBASIC11.86□□□□□ -0.51
SCN2BO60939 AC010632.2-201ENST00000588369 1224 ntBASIC11.86□□□□□ -0.51
SCN2BO60939 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC11.86□□□□□ -0.51
SCN2BO60939 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 AC087893.1-201ENST00000612818 664 ntBASIC11.86□□□□□ -0.51
SCN2BO60939 AC003991.1-211ENST00000631117 870 ntTSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC11.86□□□□□ -0.51
SCN2BO60939 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms