Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 AC131281.2-201ENST00000520478 145 ntBASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 CA15P2-201ENST00000611168 834 ntBASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA11Q9Y5H2 AC139530.1-201ENST00000575312 1977 ntBASIC21.05■□□□□ 0.96
PCDHGA11Q9Y5H2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA11Q9Y5H2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA11Q9Y5H2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA11Q9Y5H2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDHGA11Q9Y5H2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA11Q9Y5H2 AC092053.2-201ENST00000640557 1818 ntBASIC21.05■□□□□ 0.96
PCDHGA11Q9Y5H2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA11Q9Y5H2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 AL138724.1-201ENST00000606771 1088 ntBASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA11Q9Y5H2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 SYT6-210ENST00000641643 1587 ntBASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA11Q9Y5H2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA11Q9Y5H2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA11Q9Y5H2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA11Q9Y5H2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA11Q9Y5H2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA11Q9Y5H2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.96
PCDHGA11Q9Y5H2 AL031602.1-201ENST00000633169 911 ntBASIC21.02■□□□□ 0.96
PCDHGA11Q9Y5H2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDHGA11Q9Y5H2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 OR2I1P-207ENST00000453522 948 ntBASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA11Q9Y5H2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 AC068587.7-201ENST00000641602 218 ntBASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA11Q9Y5H2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 SERBP1P1-201ENST00000396021 1160 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms