Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA6Q9Y5G7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA6Q9Y5G7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA6Q9Y5G7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHGA6Q9Y5G7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA6Q9Y5G7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHGA6Q9Y5G7 LINC00526-201ENST00000581067 1875 ntBASIC20.91■□□□□ 0.94
PCDHGA6Q9Y5G7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA6Q9Y5G7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA6Q9Y5G7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 AP005435.1-201ENST00000529293 1178 ntBASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA6Q9Y5G7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PCDHGA6Q9Y5G7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDHGA6Q9Y5G7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDHGA6Q9Y5G7 GUSBP5-202ENST00000510805 1989 ntBASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 AC144652.1-201ENST00000609974 1624 ntBASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA6Q9Y5G7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 AC010525.1-201ENST00000585559 441 ntBASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 RARRES2P11-201ENST00000635158 484 ntBASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA6Q9Y5G7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 LINC01529-204ENST00000636474 1715 ntBASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 MIR6084-201ENST00000622012 110 ntBASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA6Q9Y5G7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms