Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 CLDN5-201ENST00000403084 2357 ntBASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGA9Q9Y5G4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA9Q9Y5G4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA9Q9Y5G4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA9Q9Y5G4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA9Q9Y5G4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGA9Q9Y5G4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PCDHGA9Q9Y5G4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGA9Q9Y5G4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGA9Q9Y5G4 AC068587.7-201ENST00000641602 218 ntBASIC20.33■□□□□ 0.85
PCDHGA9Q9Y5G4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA9Q9Y5G4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PCDHGA9Q9Y5G4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA9Q9Y5G4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA9Q9Y5G4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.33■□□□□ 0.84
PCDHGA9Q9Y5G4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 KRT18P61-201ENST00000585825 1298 ntBASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 RAP2CP1-201ENST00000605103 478 ntBASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 C9orf163-202ENST00000624034 2573 ntBASIC20.32■□□□□ 0.84
PCDHGA9Q9Y5G4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHGA9Q9Y5G4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 AC073111.5-205ENST00000641717 521 ntBASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA9Q9Y5G4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 BX005040.4-201ENST00000637145 1518 ntBASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 CDCA4P2-201ENST00000441182 718 ntBASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 AP004607.4-201ENST00000530158 1459 ntBASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA9Q9Y5G4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA9Q9Y5G4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA9Q9Y5G4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA9Q9Y5G4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms