Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.57■□□□□ 0.88
PCDHGB3Q9Y5G1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB3Q9Y5G1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB3Q9Y5G1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB3Q9Y5G1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDHGB3Q9Y5G1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB3Q9Y5G1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB3Q9Y5G1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB3Q9Y5G1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB3Q9Y5G1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 DUX4L19-201ENST00000557448 1267 ntBASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 AC092171.4-201ENST00000609130 632 ntBASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB3Q9Y5G1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 AC106739.1-201ENST00000617035 715 ntBASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB3Q9Y5G1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 AC005837.3-201ENST00000612163 286 ntBASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB3Q9Y5G1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB3Q9Y5G1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDHGB3Q9Y5G1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB3Q9Y5G1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB3Q9Y5G1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB3Q9Y5G1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGB3Q9Y5G1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGB3Q9Y5G1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDHGB3Q9Y5G1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHGB3Q9Y5G1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB3Q9Y5G1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB3Q9Y5G1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGB3Q9Y5G1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGB3Q9Y5G1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGB3Q9Y5G1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 AL499627.2-201ENST00000606283 725 ntBASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 AC080038.3-201ENST00000623346 1952 ntBASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGB3Q9Y5G1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms