Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 LINC01960-201ENST00000563759 1884 ntBASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 AP005435.1-201ENST00000529293 1178 ntBASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RPH3AQ9Y2J0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPH3AQ9Y2J0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPH3AQ9Y2J0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.83■□□□□ 0.77
RPH3AQ9Y2J0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.83■□□□□ 0.77
RPH3AQ9Y2J0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPH3AQ9Y2J0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPH3AQ9Y2J0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPH3AQ9Y2J0 IRS3P-201ENST00000223076 1006 ntBASIC19.83■□□□□ 0.77
RPH3AQ9Y2J0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPH3AQ9Y2J0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPH3AQ9Y2J0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.83■□□□□ 0.77
RPH3AQ9Y2J0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPH3AQ9Y2J0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.83■□□□□ 0.76
RPH3AQ9Y2J0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
RPH3AQ9Y2J0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPH3AQ9Y2J0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPH3AQ9Y2J0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPH3AQ9Y2J0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.83■□□□□ 0.76
RPH3AQ9Y2J0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 AC097381.1-201ENST00000429019 1296 ntBASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 AC087239.1-201ENST00000622671 572 ntBASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 AL031602.1-201ENST00000633169 911 ntBASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 C1orf229-201ENST00000623686 2258 ntBASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPH3AQ9Y2J0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.81■□□□□ 0.76
RPH3AQ9Y2J0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPH3AQ9Y2J0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms