Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA1Q9UND3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPIPA1Q9UND3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
NPIPA1Q9UND3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPIPA1Q9UND3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA1Q9UND3 CCDC92B-201ENST00000575506 885 ntBASIC20.01■□□□□ 0.79
NPIPA1Q9UND3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.01■□□□□ 0.79
NPIPA1Q9UND3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA1Q9UND3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA1Q9UND3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA1Q9UND3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA1Q9UND3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20■□□□□ 0.79
NPIPA1Q9UND3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NPIPA1Q9UND3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20■□□□□ 0.79
NPIPA1Q9UND3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20■□□□□ 0.79
NPIPA1Q9UND3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20■□□□□ 0.79
NPIPA1Q9UND3 AL137784.2-201ENST00000607332 1000 ntBASIC20■□□□□ 0.79
NPIPA1Q9UND3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 AC105233.4-201ENST00000642045 216 ntBASIC20■□□□□ 0.79
NPIPA1Q9UND3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20■□□□□ 0.79
NPIPA1Q9UND3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20■□□□□ 0.79
NPIPA1Q9UND3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20■□□□□ 0.79
NPIPA1Q9UND3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20■□□□□ 0.79
NPIPA1Q9UND3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 AL353803.4-201ENST00000565882 1934 ntBASIC20■□□□□ 0.79
NPIPA1Q9UND3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA1Q9UND3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 LINC02228-203ENST00000641970 1355 ntBASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 KRT18P14-201ENST00000534205 1250 ntBASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPIPA1Q9UND3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA1Q9UND3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA1Q9UND3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA1Q9UND3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA1Q9UND3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA1Q9UND3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA1Q9UND3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA1Q9UND3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPIPA1Q9UND3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.98■□□□□ 0.79
NPIPA1Q9UND3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.98■□□□□ 0.79
NPIPA1Q9UND3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA1Q9UND3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NPIPA1Q9UND3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA1Q9UND3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA1Q9UND3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPIPA1Q9UND3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NPIPA1Q9UND3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.97■□□□□ 0.79
NPIPA1Q9UND3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms