Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.85■□□□□ 0.93
CNOT11Q9UKZ1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT11Q9UKZ1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CNOT11Q9UKZ1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT11Q9UKZ1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 AL136116.3-201ENST00000402907 1138 ntBASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT11Q9UKZ1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT11Q9UKZ1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
CNOT11Q9UKZ1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT11Q9UKZ1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT11Q9UKZ1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.83■□□□□ 0.93
CNOT11Q9UKZ1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CNOT11Q9UKZ1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.83■□□□□ 0.93
CNOT11Q9UKZ1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT11Q9UKZ1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT11Q9UKZ1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT11Q9UKZ1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT11Q9UKZ1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT11Q9UKZ1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.83■□□□□ 0.92
CNOT11Q9UKZ1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 FAM99A-202ENST00000538190 1989 ntBASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT11Q9UKZ1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT11Q9UKZ1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 AC092667.1-201ENST00000434301 2586 ntBASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT11Q9UKZ1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT11Q9UKZ1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.79■□□□□ 0.92
CNOT11Q9UKZ1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT11Q9UKZ1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT11Q9UKZ1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT11Q9UKZ1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT11Q9UKZ1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT11Q9UKZ1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT11Q9UKZ1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms