Protein–RNA interactions for Protein: Q9UKG1

APPL1, DCC-interacting protein 13-alpha, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1Q9UKG1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
APPL1Q9UKG1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
APPL1Q9UKG1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 OR2I1P-207ENST00000453522 948 ntBASIC21.94■■□□□ 1.1
APPL1Q9UKG1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APPL1Q9UKG1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APPL1Q9UKG1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APPL1Q9UKG1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
APPL1Q9UKG1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.93■■□□□ 1.1
APPL1Q9UKG1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APPL1Q9UKG1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
APPL1Q9UKG1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APPL1Q9UKG1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
APPL1Q9UKG1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
APPL1Q9UKG1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 ESRRAP2-201ENST00000418437 1549 ntBASIC21.92■■□□□ 1.1
APPL1Q9UKG1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 C1orf229-201ENST00000623686 2258 ntBASIC21.92■■□□□ 1.1
APPL1Q9UKG1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APPL1Q9UKG1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 AC008764.7-201ENST00000593779 1081 ntBASIC21.91■■□□□ 1.1
APPL1Q9UKG1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APPL1Q9UKG1 AL024507.2-201ENST00000606070 2574 ntBASIC21.91■■□□□ 1.1
APPL1Q9UKG1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 MIR5787-201ENST00000611784 55 ntBASIC21.9■■□□□ 1.1
APPL1Q9UKG1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 LINC01960-201ENST00000563759 1884 ntBASIC21.9■■□□□ 1.1
APPL1Q9UKG1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APPL1Q9UKG1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
APPL1Q9UKG1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
APPL1Q9UKG1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
APPL1Q9UKG1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.89■■□□□ 1.1
APPL1Q9UKG1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
APPL1Q9UKG1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
APPL1Q9UKG1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
APPL1Q9UKG1 AC099791.1-201ENST00000416440 715 ntBASIC21.89■■□□□ 1.09
APPL1Q9UKG1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
APPL1Q9UKG1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.89■■□□□ 1.09
APPL1Q9UKG1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
APPL1Q9UKG1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.89■■□□□ 1.09
APPL1Q9UKG1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
APPL1Q9UKG1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
APPL1Q9UKG1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.89■■□□□ 1.09
APPL1Q9UKG1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.88■■□□□ 1.09
APPL1Q9UKG1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms