Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CPSF2Q9P2I0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 KRT125P-201ENST00000546827 989 ntBASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF2Q9P2I0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 AC092028.1-203ENST00000608262 953 ntBASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF2Q9P2I0 AL391422.3-201ENST00000603791 2761 ntBASIC21.76■■□□□ 1.07
CPSF2Q9P2I0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CPSF2Q9P2I0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CPSF2Q9P2I0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.76■■□□□ 1.07
CPSF2Q9P2I0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CPSF2Q9P2I0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CPSF2Q9P2I0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPSF2Q9P2I0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPSF2Q9P2I0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPSF2Q9P2I0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CPSF2Q9P2I0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 FP325331.1-202ENST00000623531 1380 ntBASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 FBXW4P1-201ENST00000426721 2239 ntBASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.75■■□□□ 1.07
CPSF2Q9P2I0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 RARRES2P1-201ENST00000474487 481 ntBASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 MTDHP2-201ENST00000601468 714 ntBASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF2Q9P2I0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF2Q9P2I0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF2Q9P2I0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CPSF2Q9P2I0 AL137060.1-201ENST00000618151 2648 ntBASIC21.73■■□□□ 1.07
CPSF2Q9P2I0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF2Q9P2I0 MIR4787-201ENST00000607364 84 ntBASIC21.73■■□□□ 1.07
CPSF2Q9P2I0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF2Q9P2I0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF2Q9P2I0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CPSF2Q9P2I0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.73■■□□□ 1.07
CPSF2Q9P2I0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms