Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CNIH4Q9P003 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH4Q9P003 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.3■□□□□ 0.84
CNIH4Q9P003 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.3■□□□□ 0.84
CNIH4Q9P003 AC242852.2-201ENST00000615738 1807 ntBASIC20.3■□□□□ 0.84
CNIH4Q9P003 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CNIH4Q9P003 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CNIH4Q9P003 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 OR2I1P-207ENST00000453522 948 ntBASIC20.3■□□□□ 0.84
CNIH4Q9P003 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.3■□□□□ 0.84
CNIH4Q9P003 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CNIH4Q9P003 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH4Q9P003 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.29■□□□□ 0.84
CNIH4Q9P003 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CNIH4Q9P003 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH4Q9P003 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH4Q9P003 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CNIH4Q9P003 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.29■□□□□ 0.84
CNIH4Q9P003 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.29■□□□□ 0.84
CNIH4Q9P003 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.29■□□□□ 0.84
CNIH4Q9P003 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.29■□□□□ 0.84
CNIH4Q9P003 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.29■□□□□ 0.84
CNIH4Q9P003 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH4Q9P003 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH4Q9P003 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CNIH4Q9P003 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.29■□□□□ 0.84
CNIH4Q9P003 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH4Q9P003 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH4Q9P003 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH4Q9P003 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH4Q9P003 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CNIH4Q9P003 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH4Q9P003 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH4Q9P003 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH4Q9P003 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH4Q9P003 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CNIH4Q9P003 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CNIH4Q9P003 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH4Q9P003 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH4Q9P003 AC127496.7-201ENST00000625110 1798 ntBASIC20.28■□□□□ 0.84
CNIH4Q9P003 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH4Q9P003 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH4Q9P003 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH4Q9P003 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CNIH4Q9P003 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH4Q9P003 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH4Q9P003 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.27■□□□□ 0.84
CNIH4Q9P003 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH4Q9P003 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.27■□□□□ 0.84
CNIH4Q9P003 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.27■□□□□ 0.84
CNIH4Q9P003 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH4Q9P003 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.27■□□□□ 0.84
CNIH4Q9P003 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH4Q9P003 SLC47A1P1-202ENST00000449666 945 ntBASIC20.27■□□□□ 0.84
CNIH4Q9P003 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH4Q9P003 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CNIH4Q9P003 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNIH4Q9P003 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
CNIH4Q9P003 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNIH4Q9P003 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH4Q9P003 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH4Q9P003 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH4Q9P003 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.26■□□□□ 0.83
CNIH4Q9P003 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH4Q9P003 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CNIH4Q9P003 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH4Q9P003 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH4Q9P003 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CNIH4Q9P003 AC105265.2-201ENST00000467189 838 ntBASIC20.26■□□□□ 0.83
CNIH4Q9P003 AC126544.1-201ENST00000580842 1059 ntBASIC20.26■□□□□ 0.83
CNIH4Q9P003 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.26■□□□□ 0.83
CNIH4Q9P003 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.26■□□□□ 0.83
CNIH4Q9P003 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CNIH4Q9P003 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH4Q9P003 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH4Q9P003 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH4Q9P003 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CNIH4Q9P003 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.26■□□□□ 0.83
CNIH4Q9P003 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CNIH4Q9P003 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH4Q9P003 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH4Q9P003 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH4Q9P003 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CNIH4Q9P003 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH4Q9P003 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.25■□□□□ 0.83
CNIH4Q9P003 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH4Q9P003 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.24■□□□□ 0.83
CNIH4Q9P003 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CNIH4Q9P003 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNIH4Q9P003 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNIH4Q9P003 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms