Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
TRMT13Q9NUP7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
TRMT13Q9NUP7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.07■■□□□ 1.44
TRMT13Q9NUP7 DUSP8P3-201ENST00000399571 1760 ntBASIC24.07■■□□□ 1.44
TRMT13Q9NUP7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRMT13Q9NUP7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
TRMT13Q9NUP7 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.07■■□□□ 1.44
TRMT13Q9NUP7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
TRMT13Q9NUP7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRMT13Q9NUP7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
TRMT13Q9NUP7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRMT13Q9NUP7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
TRMT13Q9NUP7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.06■■□□□ 1.44
TRMT13Q9NUP7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.06■■□□□ 1.44
TRMT13Q9NUP7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRMT13Q9NUP7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRMT13Q9NUP7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRMT13Q9NUP7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRMT13Q9NUP7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.06■■□□□ 1.44
TRMT13Q9NUP7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 AL139125.2-201ENST00000623134 1869 ntBASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 CD99P1-205ENST00000527459 561 ntBASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 AC142086.2-201ENST00000569753 217 ntBASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRMT13Q9NUP7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 AC083906.2-201ENST00000511578 360 ntBASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 DUX4L16-201ENST00000555130 1264 ntBASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 UBE2DNL-204ENST00000602536 740 ntBASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 AL121832.2-201ENST00000610979 668 ntBASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 TMEM191A-211ENST00000637163 1067 ntBASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRMT13Q9NUP7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRMT13Q9NUP7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.03■■□□□ 1.44
TRMT13Q9NUP7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRMT13Q9NUP7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRMT13Q9NUP7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.03■■□□□ 1.44
TRMT13Q9NUP7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRMT13Q9NUP7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRMT13Q9NUP7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
TRMT13Q9NUP7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.03■■□□□ 1.44
TRMT13Q9NUP7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRMT13Q9NUP7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 AC009237.3-201ENST00000393279 1427 ntBASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 TSPY6P-201ENST00000448518 926 ntBASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRMT13Q9NUP7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.01■■□□□ 1.43
TRMT13Q9NUP7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
TRMT13Q9NUP7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TRMT13Q9NUP7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
TRMT13Q9NUP7 GUSBP6-202ENST00000438529 1198 ntBASIC24■■□□□ 1.43
TRMT13Q9NUP7 TSPY20P-201ENST00000450910 630 ntBASIC24■■□□□ 1.43
TRMT13Q9NUP7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRMT13Q9NUP7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24■■□□□ 1.43
TRMT13Q9NUP7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24■■□□□ 1.43
TRMT13Q9NUP7 AC005181.1-201ENST00000604782 1256 ntBASIC24■■□□□ 1.43
TRMT13Q9NUP7 AC231657.2-201ENST00000624556 255 ntBASIC24■■□□□ 1.43
TRMT13Q9NUP7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24■■□□□ 1.43
TRMT13Q9NUP7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24■■□□□ 1.43
TRMT13Q9NUP7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRMT13Q9NUP7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
TRMT13Q9NUP7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRMT13Q9NUP7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRMT13Q9NUP7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms