Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRF2Q9HAW0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRF2Q9HAW0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
BRF2Q9HAW0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BRF2Q9HAW0 SERBP1P1-201ENST00000396021 1160 ntBASIC20.83■□□□□ 0.93
BRF2Q9HAW0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.83■□□□□ 0.93
BRF2Q9HAW0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRF2Q9HAW0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BRF2Q9HAW0 AC079089.2-201ENST00000531211 1277 ntBASIC20.83■□□□□ 0.93
BRF2Q9HAW0 AC011298.3-201ENST00000615796 283 ntBASIC20.83■□□□□ 0.93
BRF2Q9HAW0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.92
BRF2Q9HAW0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BRF2Q9HAW0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.83■□□□□ 0.92
BRF2Q9HAW0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BRF2Q9HAW0 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.83■□□□□ 0.92
BRF2Q9HAW0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.83■□□□□ 0.92
BRF2Q9HAW0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRF2Q9HAW0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.82■□□□□ 0.92
BRF2Q9HAW0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF2Q9HAW0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRF2Q9HAW0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF2Q9HAW0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.82■□□□□ 0.92
BRF2Q9HAW0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.82■□□□□ 0.92
BRF2Q9HAW0 AC087239.1-201ENST00000622671 572 ntBASIC20.82■□□□□ 0.92
BRF2Q9HAW0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRF2Q9HAW0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
BRF2Q9HAW0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 AC136469.2-201ENST00000623944 1028 ntBASIC20.81■□□□□ 0.92
BRF2Q9HAW0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRF2Q9HAW0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
BRF2Q9HAW0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRF2Q9HAW0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.78■□□□□ 0.92
BRF2Q9HAW0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms