Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
MAP1LC3AQ9H492 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.85■□□□□ 0.13
MAP1LC3AQ9H492 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MAP1LC3AQ9H492 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.85■□□□□ 0.13
MAP1LC3AQ9H492 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 RPS2P7-201ENST00000447334 885 ntBASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 LINC01521-201ENST00000504184 1943 ntBASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MAP1LC3AQ9H492 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
MAP1LC3AQ9H492 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
MAP1LC3AQ9H492 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MAP1LC3AQ9H492 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MAP1LC3AQ9H492 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 RNF165-205ENST00000588679 2904 ntBASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MAP1LC3AQ9H492 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MAP1LC3AQ9H492 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.8■□□□□ 0.12
MAP1LC3AQ9H492 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms