Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS33BQ9H267 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
VPS33BQ9H267 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
VPS33BQ9H267 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS33BQ9H267 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS33BQ9H267 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS33BQ9H267 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.52■■□□□ 1.84
VPS33BQ9H267 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
VPS33BQ9H267 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
VPS33BQ9H267 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
VPS33BQ9H267 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
VPS33BQ9H267 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
VPS33BQ9H267 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
VPS33BQ9H267 AF201337.1-201ENST00000520239 748 ntBASIC26.51■■□□□ 1.83
VPS33BQ9H267 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.51■■□□□ 1.83
VPS33BQ9H267 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.51■■□□□ 1.83
VPS33BQ9H267 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
VPS33BQ9H267 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
VPS33BQ9H267 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.83
VPS33BQ9H267 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
VPS33BQ9H267 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VPS33BQ9H267 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
VPS33BQ9H267 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.5■■□□□ 1.83
VPS33BQ9H267 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
VPS33BQ9H267 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.5■■□□□ 1.83
VPS33BQ9H267 DUSP8P3-201ENST00000399571 1760 ntBASIC26.5■■□□□ 1.83
VPS33BQ9H267 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
VPS33BQ9H267 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VPS33BQ9H267 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.49■■□□□ 1.83
VPS33BQ9H267 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.49■■□□□ 1.83
VPS33BQ9H267 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.49■■□□□ 1.83
VPS33BQ9H267 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.49■■□□□ 1.83
VPS33BQ9H267 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
VPS33BQ9H267 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.49■■□□□ 1.83
VPS33BQ9H267 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.49■■□□□ 1.83
VPS33BQ9H267 FAM201B-201ENST00000458407 597 ntBASIC26.49■■□□□ 1.83
VPS33BQ9H267 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS33BQ9H267 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.49■■□□□ 1.83
VPS33BQ9H267 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS33BQ9H267 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS33BQ9H267 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
VPS33BQ9H267 CNN2P6-201ENST00000439038 900 ntBASIC26.48■■□□□ 1.83
VPS33BQ9H267 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS33BQ9H267 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.48■■□□□ 1.83
VPS33BQ9H267 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.48■■□□□ 1.83
VPS33BQ9H267 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
VPS33BQ9H267 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS33BQ9H267 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS33BQ9H267 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
VPS33BQ9H267 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS33BQ9H267 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS33BQ9H267 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
VPS33BQ9H267 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS33BQ9H267 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS33BQ9H267 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS33BQ9H267 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.47■■□□□ 1.83
VPS33BQ9H267 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.47■■□□□ 1.83
VPS33BQ9H267 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS33BQ9H267 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
VPS33BQ9H267 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.47■■□□□ 1.83
VPS33BQ9H267 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS33BQ9H267 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS33BQ9H267 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
VPS33BQ9H267 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS33BQ9H267 AC055733.4-201ENST00000638462 1354 ntBASIC26.46■■□□□ 1.83
VPS33BQ9H267 LINC00543-201ENST00000567234 1845 ntBASIC26.46■■□□□ 1.83
VPS33BQ9H267 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VPS33BQ9H267 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.46■■□□□ 1.83
VPS33BQ9H267 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.46■■□□□ 1.83
VPS33BQ9H267 MIR4651-201ENST00000582622 73 ntBASIC26.46■■□□□ 1.83
VPS33BQ9H267 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VPS33BQ9H267 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VPS33BQ9H267 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.46■■□□□ 1.83
VPS33BQ9H267 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VPS33BQ9H267 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VPS33BQ9H267 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VPS33BQ9H267 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.45■■□□□ 1.82
VPS33BQ9H267 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VPS33BQ9H267 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.45■■□□□ 1.82
VPS33BQ9H267 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
VPS33BQ9H267 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VPS33BQ9H267 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VPS33BQ9H267 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VPS33BQ9H267 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.44■■□□□ 1.82
VPS33BQ9H267 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VPS33BQ9H267 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.44■■□□□ 1.82
VPS33BQ9H267 SLC7A5P1-201ENST00000568957 537 ntBASIC26.44■■□□□ 1.82
VPS33BQ9H267 AC138907.5-202ENST00000569484 235 ntBASIC26.44■■□□□ 1.82
VPS33BQ9H267 AC010536.3-201ENST00000620306 533 ntBASIC26.44■■□□□ 1.82
VPS33BQ9H267 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VPS33BQ9H267 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VPS33BQ9H267 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VPS33BQ9H267 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.43■■□□□ 1.82
VPS33BQ9H267 AL139125.2-201ENST00000623134 1869 ntBASIC26.43■■□□□ 1.82
VPS33BQ9H267 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS33BQ9H267 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS33BQ9H267 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
VPS33BQ9H267 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS33BQ9H267 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.43■■□□□ 1.82
VPS33BQ9H267 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms