Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CYSTM1Q9H1C7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CYSTM1Q9H1C7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CYSTM1Q9H1C7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CYSTM1Q9H1C7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CYSTM1Q9H1C7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CYSTM1Q9H1C7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC12.77□□□□□ -0.36
CYSTM1Q9H1C7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 AL049812.1-201ENST00000432563 2267 ntBASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CYSTM1Q9H1C7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 AP000997.3-201ENST00000623333 2250 ntBASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CYSTM1Q9H1C7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CYSTM1Q9H1C7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms