Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RASA4CP-201ENST00000424092 1398 ntBASIC19.81■□□□□ 0.76
NPAS1Q99742 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS1Q99742 AC080038.3-201ENST00000623346 1952 ntBASIC19.81■□□□□ 0.76
NPAS1Q99742 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS1Q99742 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NPAS1Q99742 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.8■□□□□ 0.76
NPAS1Q99742 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS1Q99742 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.8■□□□□ 0.76
NPAS1Q99742 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NPAS1Q99742 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.8■□□□□ 0.76
NPAS1Q99742 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NPAS1Q99742 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.8■□□□□ 0.76
NPAS1Q99742 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NPAS1Q99742 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.8■□□□□ 0.76
NPAS1Q99742 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.8■□□□□ 0.76
NPAS1Q99742 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NPAS1Q99742 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.8■□□□□ 0.76
NPAS1Q99742 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.8■□□□□ 0.76
NPAS1Q99742 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS1Q99742 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS1Q99742 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS1Q99742 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS1Q99742 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS1Q99742 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS1Q99742 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NPAS1Q99742 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.79■□□□□ 0.76
NPAS1Q99742 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.79■□□□□ 0.76
NPAS1Q99742 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.79■□□□□ 0.76
NPAS1Q99742 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.79■□□□□ 0.76
NPAS1Q99742 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.79■□□□□ 0.76
NPAS1Q99742 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NPAS1Q99742 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS1Q99742 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.79■□□□□ 0.76
NPAS1Q99742 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.78■□□□□ 0.76
NPAS1Q99742 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS1Q99742 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS1Q99742 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
NPAS1Q99742 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS1Q99742 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.78■□□□□ 0.76
NPAS1Q99742 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NPAS1Q99742 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
NPAS1Q99742 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS1Q99742 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NPAS1Q99742 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS1Q99742 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS1Q99742 AC137767.1-201ENST00000602918 1920 ntBASIC19.78■□□□□ 0.76
NPAS1Q99742 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS1Q99742 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.77■□□□□ 0.76
NPAS1Q99742 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS1Q99742 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
NPAS1Q99742 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS1Q99742 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS1Q99742 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS1Q99742 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.77■□□□□ 0.76
NPAS1Q99742 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
NPAS1Q99742 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.77■□□□□ 0.76
NPAS1Q99742 AC105265.2-201ENST00000467189 838 ntBASIC19.77■□□□□ 0.76
NPAS1Q99742 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.77■□□□□ 0.76
NPAS1Q99742 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS1Q99742 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.77■□□□□ 0.76
NPAS1Q99742 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS1Q99742 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.77■□□□□ 0.76
NPAS1Q99742 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.77■□□□□ 0.76
NPAS1Q99742 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS1Q99742 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS1Q99742 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS1Q99742 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NPAS1Q99742 TSPY26P-201ENST00000476365 1326 ntBASIC19.76■□□□□ 0.75
NPAS1Q99742 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS1Q99742 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS1Q99742 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NPAS1Q99742 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.76■□□□□ 0.75
NPAS1Q99742 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS1Q99742 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS1Q99742 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS1Q99742 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.76■□□□□ 0.75
NPAS1Q99742 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.76■□□□□ 0.75
NPAS1Q99742 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.76■□□□□ 0.75
NPAS1Q99742 AP005435.1-201ENST00000529293 1178 ntBASIC19.76■□□□□ 0.75
NPAS1Q99742 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS1Q99742 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS1Q99742 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS1Q99742 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS1Q99742 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS1Q99742 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.76■□□□□ 0.75
NPAS1Q99742 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.75■□□□□ 0.75
NPAS1Q99742 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
NPAS1Q99742 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms