Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LITAFQ99732 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LITAFQ99732 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
LITAFQ99732 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LITAFQ99732 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LITAFQ99732 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LITAFQ99732 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LITAFQ99732 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LITAFQ99732 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LITAFQ99732 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LITAFQ99732 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LITAFQ99732 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LITAFQ99732 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LITAFQ99732 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.51□□□□□ -0.09
LITAFQ99732 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LITAFQ99732 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.51□□□□□ -0.09
LITAFQ99732 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LITAFQ99732 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LITAFQ99732 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.51□□□□□ -0.09
LITAFQ99732 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LITAFQ99732 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
LITAFQ99732 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LITAFQ99732 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LITAFQ99732 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.51□□□□□ -0.09
LITAFQ99732 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LITAFQ99732 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LITAFQ99732 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.5□□□□□ -0.09
LITAFQ99732 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LITAFQ99732 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LITAFQ99732 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LITAFQ99732 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LITAFQ99732 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.5□□□□□ -0.09
LITAFQ99732 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LITAFQ99732 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LITAFQ99732 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
LITAFQ99732 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LITAFQ99732 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LITAFQ99732 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.5□□□□□ -0.09
LITAFQ99732 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.5□□□□□ -0.09
LITAFQ99732 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LITAFQ99732 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LITAFQ99732 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC14.49□□□□□ -0.09
LITAFQ99732 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LITAFQ99732 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LITAFQ99732 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LITAFQ99732 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LITAFQ99732 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LITAFQ99732 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LITAFQ99732 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.49□□□□□ -0.09
LITAFQ99732 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LITAFQ99732 ZNRF2P2-203ENST00000454624 420 ntBASIC14.49□□□□□ -0.09
LITAFQ99732 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC14.49□□□□□ -0.09
LITAFQ99732 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LITAFQ99732 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LITAFQ99732 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.49□□□□□ -0.09
LITAFQ99732 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
LITAFQ99732 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LITAFQ99732 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LITAFQ99732 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LITAFQ99732 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LITAFQ99732 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.48□□□□□ -0.09
LITAFQ99732 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LITAFQ99732 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.48□□□□□ -0.09
LITAFQ99732 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LITAFQ99732 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LITAFQ99732 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC14.48□□□□□ -0.09
LITAFQ99732 MIR3648-2-201ENST00000581792 180 ntBASIC14.48□□□□□ -0.09
LITAFQ99732 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LITAFQ99732 AC011551.1-201ENST00000614101 683 ntBASIC14.48□□□□□ -0.09
LITAFQ99732 MIR3648-1-201ENST00000615959 180 ntBASIC14.48□□□□□ -0.09
LITAFQ99732 GDI1-215ENST00000630693 786 ntTSL 4 BASIC14.48□□□□□ -0.09
LITAFQ99732 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LITAFQ99732 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LITAFQ99732 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LITAFQ99732 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.48□□□□□ -0.09
LITAFQ99732 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LITAFQ99732 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.47□□□□□ -0.09
LITAFQ99732 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.47□□□□□ -0.09
LITAFQ99732 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.47□□□□□ -0.09
LITAFQ99732 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC14.47□□□□□ -0.09
LITAFQ99732 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.47□□□□□ -0.09
LITAFQ99732 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.47□□□□□ -0.09
LITAFQ99732 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LITAFQ99732 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LITAFQ99732 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LITAFQ99732 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.46□□□□□ -0.09
LITAFQ99732 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.46□□□□□ -0.09
LITAFQ99732 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LITAFQ99732 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.46□□□□□ -0.09
LITAFQ99732 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms