Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB18PQ96TA0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.16■■□□□ 1.3
PCDHB18PQ96TA0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB18PQ96TA0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB18PQ96TA0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 OR2I1P-207ENST00000453522 948 ntBASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 AC092171.4-201ENST00000609130 632 ntBASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB18PQ96TA0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDHB18PQ96TA0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
PCDHB18PQ96TA0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHB18PQ96TA0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
PCDHB18PQ96TA0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHB18PQ96TA0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHB18PQ96TA0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB18PQ96TA0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.14■■□□□ 1.29
PCDHB18PQ96TA0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB18PQ96TA0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB18PQ96TA0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PCDHB18PQ96TA0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PCDHB18PQ96TA0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHB18PQ96TA0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHB18PQ96TA0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB18PQ96TA0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PCDHB18PQ96TA0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PCDHB18PQ96TA0 SYT6-210ENST00000641643 1587 ntBASIC23.13■■□□□ 1.29
PCDHB18PQ96TA0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHB18PQ96TA0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
PCDHB18PQ96TA0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB18PQ96TA0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHB18PQ96TA0 FBXW4P1-201ENST00000426721 2239 ntBASIC23.11■■□□□ 1.29
PCDHB18PQ96TA0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB18PQ96TA0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.11■■□□□ 1.29
PCDHB18PQ96TA0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB18PQ96TA0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.11■■□□□ 1.29
PCDHB18PQ96TA0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHB18PQ96TA0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
PCDHB18PQ96TA0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PCDHB18PQ96TA0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 AC079089.2-201ENST00000531211 1277 ntBASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHB18PQ96TA0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 AL136116.3-201ENST00000402907 1138 ntBASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 AL138724.1-201ENST00000606771 1088 ntBASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
PCDHB18PQ96TA0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 AC007375.3-201ENST00000600936 2314 ntBASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 AC136469.2-201ENST00000623944 1028 ntBASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB18PQ96TA0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms