Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40CQ96S21 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40CQ96S21 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40CQ96S21 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB40CQ96S21 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40CQ96S21 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RAB40CQ96S21 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB40CQ96S21 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RAB40CQ96S21 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB40CQ96S21 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 KRT18P24-201ENST00000344739 1156 ntBASIC17.59■□□□□ 0.41
RAB40CQ96S21 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 AC004987.1-201ENST00000428627 508 ntBASIC17.59■□□□□ 0.41
RAB40CQ96S21 ATP5G2P3-201ENST00000429083 425 ntBASIC17.59■□□□□ 0.41
RAB40CQ96S21 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
RAB40CQ96S21 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB40CQ96S21 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB40CQ96S21 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40CQ96S21 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.58■□□□□ 0.41
RAB40CQ96S21 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
RAB40CQ96S21 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40CQ96S21 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.58■□□□□ 0.41
RAB40CQ96S21 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40CQ96S21 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40CQ96S21 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40CQ96S21 AC139795.1-202ENST00000500444 432 ntBASIC17.58■□□□□ 0.4
RAB40CQ96S21 THA1P-201ENST00000590384 1145 ntBASIC17.58■□□□□ 0.4
RAB40CQ96S21 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40CQ96S21 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40CQ96S21 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40CQ96S21 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB40CQ96S21 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40CQ96S21 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAB40CQ96S21 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
RAB40CQ96S21 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB40CQ96S21 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 AC012354.3-201ENST00000623734 483 ntBASIC17.57■□□□□ 0.4
RAB40CQ96S21 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB40CQ96S21 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RAB40CQ96S21 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RAB40CQ96S21 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40CQ96S21 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB40CQ96S21 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40CQ96S21 AC073130.3-201ENST00000624389 2278 ntBASIC17.56■□□□□ 0.4
RAB40CQ96S21 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40CQ96S21 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RAB40CQ96S21 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40CQ96S21 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40CQ96S21 TSPY13P-201ENST00000338964 914 ntBASIC17.56■□□□□ 0.4
RAB40CQ96S21 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RAB40CQ96S21 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB40CQ96S21 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40CQ96S21 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB40CQ96S21 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RAB40CQ96S21 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RAB40CQ96S21 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40CQ96S21 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40CQ96S21 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RAB40CQ96S21 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40CQ96S21 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB40CQ96S21 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40CQ96S21 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40CQ96S21 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40CQ96S21 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40CQ96S21 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40CQ96S21 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB40CQ96S21 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB40CQ96S21 CA15P2-201ENST00000611168 834 ntBASIC17.55■□□□□ 0.4
RAB40CQ96S21 BHLHE23-202ENST00000612929 1109 ntBASIC17.55■□□□□ 0.4
RAB40CQ96S21 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40CQ96S21 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40CQ96S21 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40CQ96S21 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40CQ96S21 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RAB40CQ96S21 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40CQ96S21 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB40CQ96S21 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40CQ96S21 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms