Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H2AAQ96QV6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HIST1H2AAQ96QV6 AC087742.1-201ENST00000575880 1738 ntBASIC18.77■□□□□ 0.59
HIST1H2AAQ96QV6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 AC006455.2-201ENST00000429931 906 ntBASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 DUX4L19-201ENST00000557448 1267 ntBASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.76■□□□□ 0.59
HIST1H2AAQ96QV6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 LINC00526-201ENST00000581067 1875 ntBASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H2AAQ96QV6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 AL512631.2-201ENST00000604634 923 ntBASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST1H2AAQ96QV6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 MIR3181-201ENST00000578512 73 ntBASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2AAQ96QV6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 SYT6-210ENST00000641643 1587 ntBASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2AAQ96QV6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms