Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
LRCH3Q96II8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRCH3Q96II8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRCH3Q96II8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRCH3Q96II8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.73■■□□□ 1.39
LRCH3Q96II8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRCH3Q96II8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 AC083880.1-201ENST00000608266 535 ntBASIC23.72■■□□□ 1.39
LRCH3Q96II8 REXO1L12P-201ENST00000622156 912 ntBASIC23.72■■□□□ 1.39
LRCH3Q96II8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRCH3Q96II8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRCH3Q96II8 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRCH3Q96II8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
LRCH3Q96II8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRCH3Q96II8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.71■■□□□ 1.39
LRCH3Q96II8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRCH3Q96II8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.71■■□□□ 1.39
LRCH3Q96II8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRCH3Q96II8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.71■■□□□ 1.39
LRCH3Q96II8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
LRCH3Q96II8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
LRCH3Q96II8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.71■■□□□ 1.39
LRCH3Q96II8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
LRCH3Q96II8 MKRN4P-201ENST00000444706 1521 ntBASIC23.7■■□□□ 1.38
LRCH3Q96II8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.7■■□□□ 1.38
LRCH3Q96II8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
LRCH3Q96II8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.7■■□□□ 1.38
LRCH3Q96II8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
LRCH3Q96II8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
LRCH3Q96II8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRCH3Q96II8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.69■■□□□ 1.38
LRCH3Q96II8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRCH3Q96II8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.69■■□□□ 1.38
LRCH3Q96II8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.69■■□□□ 1.38
LRCH3Q96II8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRCH3Q96II8 AC092803.2-201ENST00000564287 1899 ntBASIC23.68■■□□□ 1.38
LRCH3Q96II8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRCH3Q96II8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRCH3Q96II8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRCH3Q96II8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRCH3Q96II8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRCH3Q96II8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.68■■□□□ 1.38
LRCH3Q96II8 LINC01023-201ENST00000606054 436 ntBASIC23.68■■□□□ 1.38
LRCH3Q96II8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRCH3Q96II8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.67■■□□□ 1.38
LRCH3Q96II8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRCH3Q96II8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRCH3Q96II8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRCH3Q96II8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRCH3Q96II8 MIR4497-201ENST00000583208 89 ntBASIC23.67■■□□□ 1.38
LRCH3Q96II8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.67■■□□□ 1.38
LRCH3Q96II8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRCH3Q96II8 DUSP8P4-201ENST00000399538 1761 ntBASIC23.67■■□□□ 1.38
LRCH3Q96II8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRCH3Q96II8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.67■■□□□ 1.38
LRCH3Q96II8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.67■■□□□ 1.38
LRCH3Q96II8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRCH3Q96II8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRCH3Q96II8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH3Q96II8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.66■■□□□ 1.38
LRCH3Q96II8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
LRCH3Q96II8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH3Q96II8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH3Q96II8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.66■■□□□ 1.38
LRCH3Q96II8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH3Q96II8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH3Q96II8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.66■■□□□ 1.38
LRCH3Q96II8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH3Q96II8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
LRCH3Q96II8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.66■■□□□ 1.38
LRCH3Q96II8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH3Q96II8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRCH3Q96II8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRCH3Q96II8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRCH3Q96II8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRCH3Q96II8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.65■■□□□ 1.38
LRCH3Q96II8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRCH3Q96II8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRCH3Q96II8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRCH3Q96II8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRCH3Q96II8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms