Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NAF1Q96HR8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NAF1Q96HR8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NAF1Q96HR8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NAF1Q96HR8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NAF1Q96HR8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NAF1Q96HR8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NAF1Q96HR8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NAF1Q96HR8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NAF1Q96HR8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NAF1Q96HR8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NAF1Q96HR8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NAF1Q96HR8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
NAF1Q96HR8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NAF1Q96HR8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NAF1Q96HR8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.77■■□□□ 1.08
NAF1Q96HR8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NAF1Q96HR8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NAF1Q96HR8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NAF1Q96HR8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NAF1Q96HR8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NAF1Q96HR8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NAF1Q96HR8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.77■■□□□ 1.07
NAF1Q96HR8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NAF1Q96HR8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NAF1Q96HR8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NAF1Q96HR8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NAF1Q96HR8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NAF1Q96HR8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NAF1Q96HR8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NAF1Q96HR8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NAF1Q96HR8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NAF1Q96HR8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.76■■□□□ 1.07
NAF1Q96HR8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NAF1Q96HR8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.75■■□□□ 1.07
NAF1Q96HR8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NAF1Q96HR8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.75■■□□□ 1.07
NAF1Q96HR8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NAF1Q96HR8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.75■■□□□ 1.07
NAF1Q96HR8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NAF1Q96HR8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.74■■□□□ 1.07
NAF1Q96HR8 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.74■■□□□ 1.07
NAF1Q96HR8 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.74■■□□□ 1.07
NAF1Q96HR8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NAF1Q96HR8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
NAF1Q96HR8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 ANOS2P-203ENST00000472227 1816 ntBASIC21.74■■□□□ 1.07
NAF1Q96HR8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NAF1Q96HR8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.74■■□□□ 1.07
NAF1Q96HR8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NAF1Q96HR8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.74■■□□□ 1.07
NAF1Q96HR8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NAF1Q96HR8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.73■■□□□ 1.07
NAF1Q96HR8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NAF1Q96HR8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NAF1Q96HR8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms