Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
MRPL53Q96EL3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.34■□□□□ 0.21
MRPL53Q96EL3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.34■□□□□ 0.21
MRPL53Q96EL3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPL53Q96EL3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
MRPL53Q96EL3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPL53Q96EL3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 AL031602.1-201ENST00000633169 911 ntBASIC16.33■□□□□ 0.2
MRPL53Q96EL3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPL53Q96EL3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 FAM99A-202ENST00000538190 1989 ntBASIC16.32■□□□□ 0.2
MRPL53Q96EL3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL53Q96EL3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 AC009299.2-201ENST00000482477 511 ntBASIC16.31■□□□□ 0.2
MRPL53Q96EL3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 AC068587.7-201ENST00000641602 218 ntBASIC16.31■□□□□ 0.2
MRPL53Q96EL3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL53Q96EL3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 AC079089.2-201ENST00000531211 1277 ntBASIC16.3■□□□□ 0.2
MRPL53Q96EL3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPL53Q96EL3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL53Q96EL3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL53Q96EL3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.29■□□□□ 0.2
MRPL53Q96EL3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.29■□□□□ 0.2
MRPL53Q96EL3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL53Q96EL3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.29■□□□□ 0.2
MRPL53Q96EL3 RARRES2P1-201ENST00000474487 481 ntBASIC16.29■□□□□ 0.2
MRPL53Q96EL3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.29■□□□□ 0.2
MRPL53Q96EL3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPL53Q96EL3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.29■□□□□ 0.2
MRPL53Q96EL3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MRPL53Q96EL3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.29■□□□□ 0.2
MRPL53Q96EL3 AC133637.1-201ENST00000624115 1537 ntBASIC16.29■□□□□ 0.2
MRPL53Q96EL3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL53Q96EL3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms