Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 AL358852.1-201ENST00000623174 1268 ntBASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SH3KBP1Q96B97 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SH3KBP1Q96B97 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3KBP1Q96B97 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH3KBP1Q96B97 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3KBP1Q96B97 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH3KBP1Q96B97 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.45■■□□□ 1.02
SH3KBP1Q96B97 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.45■■□□□ 1.02
SH3KBP1Q96B97 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.45■■□□□ 1.02
SH3KBP1Q96B97 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3KBP1Q96B97 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH3KBP1Q96B97 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 AC068587.7-201ENST00000641602 218 ntBASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 AC004687.1-201ENST00000579003 1625 ntBASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SH3KBP1Q96B97 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 AL354811.1-201ENST00000610286 706 ntBASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3KBP1Q96B97 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
SH3KBP1Q96B97 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3KBP1Q96B97 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.42■■□□□ 1.02
SH3KBP1Q96B97 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SH3KBP1Q96B97 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.42■■□□□ 1.02
SH3KBP1Q96B97 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3KBP1Q96B97 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SH3KBP1Q96B97 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SH3KBP1Q96B97 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH3KBP1Q96B97 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.4■■□□□ 1.02
SH3KBP1Q96B97 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SH3KBP1Q96B97 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SH3KBP1Q96B97 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3KBP1Q96B97 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3KBP1Q96B97 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.4■■□□□ 1.02
SH3KBP1Q96B97 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SH3KBP1Q96B97 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH3KBP1Q96B97 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH3KBP1Q96B97 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3KBP1Q96B97 YBX1P1-201ENST00000445822 960 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms