Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 AL449106.1-201ENST00000608517 1980 ntBASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYNE2Q8WXH0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 AC233263.1-201ENST00000578059 224 ntBASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 BX664615.1-201ENST00000443558 458 ntBASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 AC233702.5-201ENST00000584107 538 ntBASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 PVRIG2P-201ENST00000435460 978 ntBASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC9.05□□□□□ -0.96
SYNE2Q8WXH0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 TERF1P5-201ENST00000477545 1207 ntBASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 AC105020.6-201ENST00000621523 1217 ntBASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SYNE2Q8WXH0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 KRT17P2-201ENST00000300992 1314 ntBASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
SYNE2Q8WXH0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms