Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CKAP2Q8WWK9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 FP325331.1-202ENST00000623531 1380 ntBASIC21.61■■□□□ 1.05
CKAP2Q8WWK9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CKAP2Q8WWK9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CKAP2Q8WWK9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
CKAP2Q8WWK9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CKAP2Q8WWK9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CKAP2Q8WWK9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CKAP2Q8WWK9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.58■■□□□ 1.04
CKAP2Q8WWK9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CKAP2Q8WWK9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
CKAP2Q8WWK9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 MIR4281-201ENST00000580852 62 ntBASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CKAP2Q8WWK9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 AC009086.3-201ENST00000623486 1008 ntBASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CKAP2Q8WWK9 RNF126P1-201ENST00000567452 1320 ntBASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CKAP2Q8WWK9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
CKAP2Q8WWK9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms