Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.28■■□□□ 1.16
SHROOM3Q8TF72 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 AC126544.1-201ENST00000580842 1059 ntBASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM3Q8TF72 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SHROOM3Q8TF72 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SHROOM3Q8TF72 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
SHROOM3Q8TF72 AC008764.7-201ENST00000593779 1081 ntBASIC22.27■■□□□ 1.15
SHROOM3Q8TF72 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 LINC00526-201ENST00000581067 1875 ntBASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 AC137767.1-201ENST00000602918 1920 ntBASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM3Q8TF72 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 AC068587.7-201ENST00000641602 218 ntBASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SHROOM3Q8TF72 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 ECEL1P1-201ENST00000373592 1742 ntBASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 EDA-201ENST00000338901 1233 ntBASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 AC087623.3-201ENST00000607047 1098 ntBASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SHROOM3Q8TF72 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 AC105265.2-201ENST00000467189 838 ntBASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 AC233992.3-201ENST00000607491 485 ntBASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 AP005435.1-201ENST00000529293 1178 ntBASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.23■■□□□ 1.15
SHROOM3Q8TF72 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM3Q8TF72 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
SHROOM3Q8TF72 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM3Q8TF72 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SHROOM3Q8TF72 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM3Q8TF72 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM3Q8TF72 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM3Q8TF72 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.22■■□□□ 1.15
SHROOM3Q8TF72 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.22■■□□□ 1.15
SHROOM3Q8TF72 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHROOM3Q8TF72 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 AL162430.1-201ENST00000480705 870 ntBASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHROOM3Q8TF72 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SHROOM3Q8TF72 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.2■■□□□ 1.14
SHROOM3Q8TF72 AC097381.1-201ENST00000429019 1296 ntBASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms