Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCC2Q8TAQ2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 AP001330.3-201ENST00000520123 633 ntBASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SMARCC2Q8TAQ2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCC2Q8TAQ2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
SMARCC2Q8TAQ2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCC2Q8TAQ2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCC2Q8TAQ2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCC2Q8TAQ2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCC2Q8TAQ2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCC2Q8TAQ2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCC2Q8TAQ2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCC2Q8TAQ2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCC2Q8TAQ2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 AL136967.2-201ENST00000623968 743 ntBASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.52■■□□□ 1.68
SMARCC2Q8TAQ2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
SMARCC2Q8TAQ2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 MIR939-201ENST00000401314 82 ntBASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 AC133637.1-201ENST00000624115 1537 ntBASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 C11orf96-202ENST00000528572 1834 ntBASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCC2Q8TAQ2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.5■■□□□ 1.67
SMARCC2Q8TAQ2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
SMARCC2Q8TAQ2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.5■■□□□ 1.67
SMARCC2Q8TAQ2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.5■■□□□ 1.67
SMARCC2Q8TAQ2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SMARCC2Q8TAQ2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.5■■□□□ 1.67
SMARCC2Q8TAQ2 AC008764.7-201ENST00000593779 1081 ntBASIC25.5■■□□□ 1.67
SMARCC2Q8TAQ2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.5■■□□□ 1.67
SMARCC2Q8TAQ2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMARCC2Q8TAQ2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 AC027682.1-201ENST00000562846 899 ntBASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 AL031602.1-201ENST00000633169 911 ntBASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMARCC2Q8TAQ2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMARCC2Q8TAQ2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms