Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
TRIM58Q8NG06 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM58Q8NG06 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM58Q8NG06 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM58Q8NG06 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.08■■□□□ 1.29
TRIM58Q8NG06 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.08■■□□□ 1.29
TRIM58Q8NG06 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
TRIM58Q8NG06 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.08■■□□□ 1.29
TRIM58Q8NG06 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM58Q8NG06 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM58Q8NG06 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM58Q8NG06 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM58Q8NG06 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM58Q8NG06 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM58Q8NG06 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM58Q8NG06 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM58Q8NG06 AC103834.1-201ENST00000520383 144 ntBASIC23.07■■□□□ 1.28
TRIM58Q8NG06 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.07■■□□□ 1.28
TRIM58Q8NG06 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.07■■□□□ 1.28
TRIM58Q8NG06 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM58Q8NG06 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM58Q8NG06 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.07■■□□□ 1.28
TRIM58Q8NG06 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 AC103724.3-201ENST00000564481 992 ntBASIC23.06■■□□□ 1.28
TRIM58Q8NG06 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 SLC25A24-204ENST00000569674 2357 ntBASIC23.06■■□□□ 1.28
TRIM58Q8NG06 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.06■■□□□ 1.28
TRIM58Q8NG06 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 Z98882.1-201ENST00000622160 2253 ntBASIC23.05■■□□□ 1.28
TRIM58Q8NG06 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM58Q8NG06 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
TRIM58Q8NG06 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM58Q8NG06 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM58Q8NG06 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
TRIM58Q8NG06 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM58Q8NG06 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM58Q8NG06 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.02■■□□□ 1.28
TRIM58Q8NG06 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM58Q8NG06 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM58Q8NG06 YBX1P4-201ENST00000392794 808 ntBASIC23.02■■□□□ 1.28
TRIM58Q8NG06 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM58Q8NG06 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.02■■□□□ 1.28
TRIM58Q8NG06 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM58Q8NG06 AC021242.3-201ENST00000607598 1377 ntBASIC23.01■■□□□ 1.27
TRIM58Q8NG06 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM58Q8NG06 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM58Q8NG06 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
TRIM58Q8NG06 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23■■□□□ 1.27
TRIM58Q8NG06 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23■■□□□ 1.27
TRIM58Q8NG06 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM58Q8NG06 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23■■□□□ 1.27
TRIM58Q8NG06 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23■■□□□ 1.27
TRIM58Q8NG06 AC009102.2-201ENST00000606772 1639 ntBASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms