Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.4■□□□□ 0.86
PSD4Q8NDX1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.4■□□□□ 0.86
PSD4Q8NDX1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.4■□□□□ 0.86
PSD4Q8NDX1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PSD4Q8NDX1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.39■□□□□ 0.86
PSD4Q8NDX1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.39■□□□□ 0.85
PSD4Q8NDX1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PSD4Q8NDX1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PSD4Q8NDX1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.39■□□□□ 0.85
PSD4Q8NDX1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.39■□□□□ 0.85
PSD4Q8NDX1 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.39■□□□□ 0.85
PSD4Q8NDX1 C1orf229-201ENST00000623686 2258 ntBASIC20.39■□□□□ 0.85
PSD4Q8NDX1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PSD4Q8NDX1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PSD4Q8NDX1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PSD4Q8NDX1 AC079630.1-202ENST00000618127 1840 ntBASIC20.39■□□□□ 0.85
PSD4Q8NDX1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.39■□□□□ 0.85
PSD4Q8NDX1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.38■□□□□ 0.85
PSD4Q8NDX1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 SLC47A1P1-202ENST00000449666 945 ntBASIC20.37■□□□□ 0.85
PSD4Q8NDX1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PSD4Q8NDX1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.36■□□□□ 0.85
PSD4Q8NDX1 AC126544.1-201ENST00000580842 1059 ntBASIC20.36■□□□□ 0.85
PSD4Q8NDX1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PSD4Q8NDX1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.35■□□□□ 0.85
PSD4Q8NDX1 LINC00526-201ENST00000581067 1875 ntBASIC20.35■□□□□ 0.85
PSD4Q8NDX1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 GUSBP5-202ENST00000510805 1989 ntBASIC20.34■□□□□ 0.85
PSD4Q8NDX1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSD4Q8NDX1 AL137060.1-201ENST00000618151 2648 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms