Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.22■□□□□ 0.99
CPSF7Q8N684 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF7Q8N684 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.22■□□□□ 0.99
CPSF7Q8N684 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF7Q8N684 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF7Q8N684 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF7Q8N684 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.21■□□□□ 0.99
CPSF7Q8N684 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF7Q8N684 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.21■□□□□ 0.99
CPSF7Q8N684 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.21■□□□□ 0.99
CPSF7Q8N684 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.21■□□□□ 0.99
CPSF7Q8N684 MIR3621-201ENST00000580529 85 ntBASIC21.21■□□□□ 0.99
CPSF7Q8N684 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.21■□□□□ 0.99
CPSF7Q8N684 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF7Q8N684 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CPSF7Q8N684 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.21■□□□□ 0.99
CPSF7Q8N684 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF7Q8N684 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF7Q8N684 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.21■□□□□ 0.99
CPSF7Q8N684 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CPSF7Q8N684 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF7Q8N684 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CPSF7Q8N684 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.2■□□□□ 0.99
CPSF7Q8N684 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CPSF7Q8N684 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPSF7Q8N684 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.2■□□□□ 0.98
CPSF7Q8N684 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.2■□□□□ 0.98
CPSF7Q8N684 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.2■□□□□ 0.98
CPSF7Q8N684 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.2■□□□□ 0.98
CPSF7Q8N684 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.2■□□□□ 0.98
CPSF7Q8N684 AL356740.2-201ENST00000601559 647 ntBASIC21.2■□□□□ 0.98
CPSF7Q8N684 SNX5-217ENST00000606557 1087 ntBASIC21.2■□□□□ 0.98
CPSF7Q8N684 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CPSF7Q8N684 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.2■□□□□ 0.98
CPSF7Q8N684 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.19■□□□□ 0.98
CPSF7Q8N684 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPSF7Q8N684 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPSF7Q8N684 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPSF7Q8N684 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CPSF7Q8N684 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPSF7Q8N684 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPSF7Q8N684 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPSF7Q8N684 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.19■□□□□ 0.98
CPSF7Q8N684 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.19■□□□□ 0.98
CPSF7Q8N684 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.19■□□□□ 0.98
CPSF7Q8N684 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.19■□□□□ 0.98
CPSF7Q8N684 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPSF7Q8N684 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPSF7Q8N684 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.19■□□□□ 0.98
CPSF7Q8N684 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPSF7Q8N684 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPSF7Q8N684 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPSF7Q8N684 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPSF7Q8N684 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.18■□□□□ 0.98
CPSF7Q8N684 LINC01529-204ENST00000636474 1715 ntBASIC21.18■□□□□ 0.98
CPSF7Q8N684 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPSF7Q8N684 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CPSF7Q8N684 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPSF7Q8N684 AL136116.3-201ENST00000402907 1138 ntBASIC21.18■□□□□ 0.98
CPSF7Q8N684 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CPSF7Q8N684 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CPSF7Q8N684 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.18■□□□□ 0.98
CPSF7Q8N684 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.18■□□□□ 0.98
CPSF7Q8N684 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPSF7Q8N684 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPSF7Q8N684 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPSF7Q8N684 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPSF7Q8N684 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPSF7Q8N684 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPSF7Q8N684 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CPSF7Q8N684 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CPSF7Q8N684 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.17■□□□□ 0.98
CPSF7Q8N684 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CPSF7Q8N684 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.17■□□□□ 0.98
CPSF7Q8N684 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CPSF7Q8N684 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.17■□□□□ 0.98
CPSF7Q8N684 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CPSF7Q8N684 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPSF7Q8N684 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPSF7Q8N684 FP325331.1-202ENST00000623531 1380 ntBASIC21.17■□□□□ 0.98
CPSF7Q8N684 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPSF7Q8N684 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPSF7Q8N684 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPSF7Q8N684 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPSF7Q8N684 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.17■□□□□ 0.98
CPSF7Q8N684 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.16■□□□□ 0.98
CPSF7Q8N684 LINC01960-201ENST00000563759 1884 ntBASIC21.16■□□□□ 0.98
CPSF7Q8N684 AC244015.2-201ENST00000616358 1861 ntBASIC21.16■□□□□ 0.98
CPSF7Q8N684 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.16■□□□□ 0.98
CPSF7Q8N684 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.16■□□□□ 0.98
CPSF7Q8N684 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPSF7Q8N684 PKD1P6-201ENST00000343738 4769 ntBASIC21.16■□□□□ 0.98
CPSF7Q8N684 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPSF7Q8N684 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.15■□□□□ 0.98
CPSF7Q8N684 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPSF7Q8N684 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPSF7Q8N684 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.15■□□□□ 0.98
CPSF7Q8N684 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPSF7Q8N684 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CPSF7Q8N684 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms