Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SIX5Q8N196 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SIX5Q8N196 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.36■■□□□ 1.17
SIX5Q8N196 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SIX5Q8N196 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SIX5Q8N196 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SIX5Q8N196 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.36■■□□□ 1.17
SIX5Q8N196 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.36■■□□□ 1.17
SIX5Q8N196 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SIX5Q8N196 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SIX5Q8N196 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SIX5Q8N196 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SIX5Q8N196 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.35■■□□□ 1.17
SIX5Q8N196 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SIX5Q8N196 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SIX5Q8N196 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SIX5Q8N196 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.35■■□□□ 1.17
SIX5Q8N196 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.35■■□□□ 1.17
SIX5Q8N196 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SIX5Q8N196 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.35■■□□□ 1.17
SIX5Q8N196 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.35■■□□□ 1.17
SIX5Q8N196 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SIX5Q8N196 KRT87P-202ENST00000534226 1464 ntBASIC22.34■■□□□ 1.17
SIX5Q8N196 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SIX5Q8N196 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SIX5Q8N196 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SIX5Q8N196 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SIX5Q8N196 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.34■■□□□ 1.17
SIX5Q8N196 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SIX5Q8N196 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SIX5Q8N196 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.34■■□□□ 1.17
SIX5Q8N196 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SIX5Q8N196 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIX5Q8N196 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SIX5Q8N196 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.33■■□□□ 1.17
SIX5Q8N196 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SIX5Q8N196 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SIX5Q8N196 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIX5Q8N196 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIX5Q8N196 AF201337.1-201ENST00000520239 748 ntBASIC22.32■■□□□ 1.16
SIX5Q8N196 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
SIX5Q8N196 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SIX5Q8N196 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
SIX5Q8N196 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIX5Q8N196 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIX5Q8N196 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
SIX5Q8N196 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SIX5Q8N196 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SIX5Q8N196 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.31■■□□□ 1.16
SIX5Q8N196 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SIX5Q8N196 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SIX5Q8N196 POU5F1P3-201ENST00000428824 1078 ntBASIC22.31■■□□□ 1.16
SIX5Q8N196 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.31■■□□□ 1.16
SIX5Q8N196 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
SIX5Q8N196 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.31■■□□□ 1.16
SIX5Q8N196 AC098934.4-201ENST00000564127 592 ntBASIC22.31■■□□□ 1.16
SIX5Q8N196 AC105036.2-201ENST00000569468 176 ntBASIC22.31■■□□□ 1.16
SIX5Q8N196 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SIX5Q8N196 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIX5Q8N196 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.31■■□□□ 1.16
SIX5Q8N196 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIX5Q8N196 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.31■■□□□ 1.16
SIX5Q8N196 OXCT2P1-201ENST00000447263 1535 ntBASIC22.31■■□□□ 1.16
SIX5Q8N196 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.3■■□□□ 1.16
SIX5Q8N196 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIX5Q8N196 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIX5Q8N196 KRT18P29-201ENST00000397031 1267 ntBASIC22.3■■□□□ 1.16
SIX5Q8N196 AC073210.2-201ENST00000430369 194 ntBASIC22.3■■□□□ 1.16
SIX5Q8N196 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIX5Q8N196 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.3■■□□□ 1.16
SIX5Q8N196 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.3■■□□□ 1.16
SIX5Q8N196 MYCNOS-205ENST00000641950 531 ntBASIC22.3■■□□□ 1.16
SIX5Q8N196 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIX5Q8N196 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIX5Q8N196 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIX5Q8N196 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.29■■□□□ 1.16
SIX5Q8N196 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIX5Q8N196 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIX5Q8N196 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.29■■□□□ 1.16
SIX5Q8N196 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SIX5Q8N196 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
SIX5Q8N196 ITM2C-210ENST00000620962 501 ntBASIC22.29■■□□□ 1.16
SIX5Q8N196 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.29■■□□□ 1.16
SIX5Q8N196 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SIX5Q8N196 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.29■■□□□ 1.16
SIX5Q8N196 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIX5Q8N196 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.29■■□□□ 1.16
SIX5Q8N196 AP003733.4-201ENST00000623785 1697 ntBASIC22.29■■□□□ 1.16
SIX5Q8N196 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIX5Q8N196 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SIX5Q8N196 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SIX5Q8N196 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SIX5Q8N196 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.28■■□□□ 1.16
SIX5Q8N196 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
SIX5Q8N196 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
SIX5Q8N196 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SIX5Q8N196 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.28■■□□□ 1.16
SIX5Q8N196 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SIX5Q8N196 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SIX5Q8N196 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms