Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 FAM201B-201ENST00000458407 597 ntBASIC23.04■■□□□ 1.28
RNF135Q8IUD6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 AL121832.2-201ENST00000610979 668 ntBASIC23.04■■□□□ 1.28
RNF135Q8IUD6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF135Q8IUD6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF135Q8IUD6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF135Q8IUD6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF135Q8IUD6 AC083906.2-201ENST00000511578 360 ntBASIC23.03■■□□□ 1.28
RNF135Q8IUD6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.03■■□□□ 1.28
RNF135Q8IUD6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF135Q8IUD6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF135Q8IUD6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF135Q8IUD6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.03■■□□□ 1.28
RNF135Q8IUD6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF135Q8IUD6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF135Q8IUD6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF135Q8IUD6 TSPY6P-201ENST00000448518 926 ntBASIC23.01■■□□□ 1.27
RNF135Q8IUD6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF135Q8IUD6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF135Q8IUD6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF135Q8IUD6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RNF135Q8IUD6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF135Q8IUD6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF135Q8IUD6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF135Q8IUD6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF135Q8IUD6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF135Q8IUD6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF135Q8IUD6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23■■□□□ 1.27
RNF135Q8IUD6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF135Q8IUD6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF135Q8IUD6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23■■□□□ 1.27
RNF135Q8IUD6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23■■□□□ 1.27
RNF135Q8IUD6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23■■□□□ 1.27
RNF135Q8IUD6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23■■□□□ 1.27
RNF135Q8IUD6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF135Q8IUD6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RNF135Q8IUD6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RNF135Q8IUD6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
RNF135Q8IUD6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 AL050303.2-201ENST00000619798 666 ntBASIC22.98■■□□□ 1.27
RNF135Q8IUD6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RNF135Q8IUD6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms