Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB43Q86YS6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
RAB43Q86YS6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.66■□□□□ 0.9
RAB43Q86YS6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB43Q86YS6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB43Q86YS6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB43Q86YS6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.66■□□□□ 0.9
RAB43Q86YS6 DUX4L2-201ENST00000561772 1275 ntBASIC20.66■□□□□ 0.9
RAB43Q86YS6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB43Q86YS6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB43Q86YS6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
RAB43Q86YS6 DUX4L6-201ENST00000626483 1275 ntBASIC20.66■□□□□ 0.9
RAB43Q86YS6 DUX4L1-201ENST00000627662 1275 ntBASIC20.66■□□□□ 0.9
RAB43Q86YS6 DUX4L8-201ENST00000629013 1275 ntBASIC20.66■□□□□ 0.9
RAB43Q86YS6 DUX4L3-201ENST00000630187 1275 ntBASIC20.66■□□□□ 0.9
RAB43Q86YS6 DUX4L7-201ENST00000630678 1275 ntBASIC20.66■□□□□ 0.9
RAB43Q86YS6 DUX4L5-201ENST00000630834 1275 ntBASIC20.66■□□□□ 0.9
RAB43Q86YS6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB43Q86YS6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB43Q86YS6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB43Q86YS6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB43Q86YS6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB43Q86YS6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB43Q86YS6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB43Q86YS6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB43Q86YS6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB43Q86YS6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB43Q86YS6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.65■□□□□ 0.9
RAB43Q86YS6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB43Q86YS6 LINC02228-203ENST00000641970 1355 ntBASIC20.65■□□□□ 0.9
RAB43Q86YS6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.65■□□□□ 0.9
RAB43Q86YS6 AC105233.4-201ENST00000642045 216 ntBASIC20.65■□□□□ 0.9
RAB43Q86YS6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RAB43Q86YS6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB43Q86YS6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB43Q86YS6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB43Q86YS6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.64■□□□□ 0.9
RAB43Q86YS6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
RAB43Q86YS6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB43Q86YS6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB43Q86YS6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RAB43Q86YS6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RAB43Q86YS6 AL137784.2-201ENST00000607332 1000 ntBASIC20.64■□□□□ 0.89
RAB43Q86YS6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB43Q86YS6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RAB43Q86YS6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB43Q86YS6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB43Q86YS6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB43Q86YS6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB43Q86YS6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB43Q86YS6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB43Q86YS6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB43Q86YS6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB43Q86YS6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB43Q86YS6 CCDC92B-201ENST00000575506 885 ntBASIC20.63■□□□□ 0.89
RAB43Q86YS6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RAB43Q86YS6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB43Q86YS6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB43Q86YS6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB43Q86YS6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB43Q86YS6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB43Q86YS6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB43Q86YS6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
RAB43Q86YS6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB43Q86YS6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB43Q86YS6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB43Q86YS6 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.62■□□□□ 0.89
RAB43Q86YS6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.62■□□□□ 0.89
RAB43Q86YS6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB43Q86YS6 AC022517.1-201ENST00000592429 346 ntBASIC20.62■□□□□ 0.89
RAB43Q86YS6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB43Q86YS6 LINC00565-201ENST00000562710 2331 ntBASIC20.62■□□□□ 0.89
RAB43Q86YS6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB43Q86YS6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB43Q86YS6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB43Q86YS6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB43Q86YS6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB43Q86YS6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB43Q86YS6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB43Q86YS6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB43Q86YS6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 KRT18P14-201ENST00000534205 1250 ntBASIC20.61■□□□□ 0.89
RAB43Q86YS6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 AC068587.7-201ENST00000641602 218 ntBASIC20.61■□□□□ 0.89
RAB43Q86YS6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB43Q86YS6 C9orf163-202ENST00000624034 2573 ntBASIC20.61■□□□□ 0.89
RAB43Q86YS6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RAB43Q86YS6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB43Q86YS6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms