Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
VRK2Q86Y07 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.11■□□□□ 0.81
VRK2Q86Y07 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.11■□□□□ 0.81
VRK2Q86Y07 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VRK2Q86Y07 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
VRK2Q86Y07 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VRK2Q86Y07 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VRK2Q86Y07 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VRK2Q86Y07 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VRK2Q86Y07 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VRK2Q86Y07 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.11■□□□□ 0.81
VRK2Q86Y07 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.11■□□□□ 0.81
VRK2Q86Y07 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
VRK2Q86Y07 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VRK2Q86Y07 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.1■□□□□ 0.81
VRK2Q86Y07 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.1■□□□□ 0.81
VRK2Q86Y07 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VRK2Q86Y07 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VRK2Q86Y07 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
VRK2Q86Y07 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.1■□□□□ 0.81
VRK2Q86Y07 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
VRK2Q86Y07 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VRK2Q86Y07 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VRK2Q86Y07 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.1■□□□□ 0.81
VRK2Q86Y07 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.1■□□□□ 0.81
VRK2Q86Y07 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.1■□□□□ 0.81
VRK2Q86Y07 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
VRK2Q86Y07 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
VRK2Q86Y07 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK2Q86Y07 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK2Q86Y07 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VRK2Q86Y07 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK2Q86Y07 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK2Q86Y07 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VRK2Q86Y07 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.09■□□□□ 0.81
VRK2Q86Y07 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 AL031602.1-201ENST00000633169 911 ntBASIC20.09■□□□□ 0.81
VRK2Q86Y07 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK2Q86Y07 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK2Q86Y07 AC007375.3-201ENST00000600936 2314 ntBASIC20.09■□□□□ 0.81
VRK2Q86Y07 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK2Q86Y07 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK2Q86Y07 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.09■□□□□ 0.81
VRK2Q86Y07 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VRK2Q86Y07 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.08■□□□□ 0.81
VRK2Q86Y07 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
VRK2Q86Y07 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VRK2Q86Y07 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.08■□□□□ 0.81
VRK2Q86Y07 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.08■□□□□ 0.81
VRK2Q86Y07 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VRK2Q86Y07 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.08■□□□□ 0.81
VRK2Q86Y07 MIR4466-201ENST00000606121 54 ntBASIC20.08■□□□□ 0.81
VRK2Q86Y07 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VRK2Q86Y07 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.08■□□□□ 0.8
VRK2Q86Y07 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VRK2Q86Y07 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.08■□□□□ 0.8
VRK2Q86Y07 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VRK2Q86Y07 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VRK2Q86Y07 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VRK2Q86Y07 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VRK2Q86Y07 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VRK2Q86Y07 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VRK2Q86Y07 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
VRK2Q86Y07 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VRK2Q86Y07 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
VRK2Q86Y07 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
VRK2Q86Y07 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.07■□□□□ 0.8
VRK2Q86Y07 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VRK2Q86Y07 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VRK2Q86Y07 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
VRK2Q86Y07 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VRK2Q86Y07 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
VRK2Q86Y07 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.06■□□□□ 0.8
VRK2Q86Y07 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
VRK2Q86Y07 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.06■□□□□ 0.8
VRK2Q86Y07 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.06■□□□□ 0.8
VRK2Q86Y07 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
VRK2Q86Y07 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VRK2Q86Y07 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VRK2Q86Y07 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VRK2Q86Y07 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK2Q86Y07 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
VRK2Q86Y07 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.05■□□□□ 0.8
VRK2Q86Y07 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK2Q86Y07 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VRK2Q86Y07 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK2Q86Y07 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms