Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CCDC25Q86WR0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC25Q86WR0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC25Q86WR0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.39■■□□□ 1.17
CCDC25Q86WR0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC25Q86WR0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 AC005229.4-201ENST00000610085 2198 ntBASIC22.38■■□□□ 1.17
CCDC25Q86WR0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 AC009086.3-201ENST00000623486 1008 ntBASIC22.38■■□□□ 1.17
CCDC25Q86WR0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CCDC25Q86WR0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC25Q86WR0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC25Q86WR0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.36■■□□□ 1.17
CCDC25Q86WR0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC25Q86WR0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC25Q86WR0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
CCDC25Q86WR0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC25Q86WR0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.36■■□□□ 1.17
CCDC25Q86WR0 AC103834.1-201ENST00000520383 144 ntBASIC22.36■■□□□ 1.17
CCDC25Q86WR0 AC103724.3-201ENST00000564481 992 ntBASIC22.36■■□□□ 1.17
CCDC25Q86WR0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.36■■□□□ 1.17
CCDC25Q86WR0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC25Q86WR0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC25Q86WR0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC25Q86WR0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC25Q86WR0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
CCDC25Q86WR0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC25Q86WR0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC25Q86WR0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.35■■□□□ 1.17
CCDC25Q86WR0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.35■■□□□ 1.17
CCDC25Q86WR0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC25Q86WR0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC25Q86WR0 AC004687.1-201ENST00000579003 1625 ntBASIC22.35■■□□□ 1.17
CCDC25Q86WR0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC25Q86WR0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 YBX1P4-201ENST00000392794 808 ntBASIC22.33■■□□□ 1.17
CCDC25Q86WR0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.33■■□□□ 1.17
CCDC25Q86WR0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CCDC25Q86WR0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CCDC25Q86WR0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CCDC25Q86WR0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 AC137630.3-201ENST00000607245 391 ntBASIC22.32■■□□□ 1.16
CCDC25Q86WR0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC25Q86WR0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms