Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
LYSMD3Q7Z3D4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD3Q7Z3D4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 IGHV3-19-201ENST00000521488 291 ntBASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 AC087239.1-201ENST00000622671 572 ntBASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 AC233723.2-201ENST00000623798 2106 ntBASIC21.85■■□□□ 1.09
LYSMD3Q7Z3D4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.84■■□□□ 1.09
LYSMD3Q7Z3D4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD3Q7Z3D4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD3Q7Z3D4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD3Q7Z3D4 TSPY26P-201ENST00000476365 1326 ntBASIC21.84■■□□□ 1.09
LYSMD3Q7Z3D4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD3Q7Z3D4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.84■■□□□ 1.09
LYSMD3Q7Z3D4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.84■■□□□ 1.09
LYSMD3Q7Z3D4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.84■■□□□ 1.09
LYSMD3Q7Z3D4 AC010141.3-201ENST00000456659 717 ntBASIC21.84■■□□□ 1.09
LYSMD3Q7Z3D4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LYSMD3Q7Z3D4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
LYSMD3Q7Z3D4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD3Q7Z3D4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
LYSMD3Q7Z3D4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD3Q7Z3D4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD3Q7Z3D4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.83■■□□□ 1.08
LYSMD3Q7Z3D4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 AC105265.2-201ENST00000467189 838 ntBASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 AC137767.1-201ENST00000602918 1920 ntBASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 AC127496.7-201ENST00000625110 1798 ntBASIC21.82■■□□□ 1.08
LYSMD3Q7Z3D4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD3Q7Z3D4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD3Q7Z3D4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD3Q7Z3D4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD3Q7Z3D4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
LYSMD3Q7Z3D4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LYSMD3Q7Z3D4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD3Q7Z3D4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD3Q7Z3D4 AC080038.3-201ENST00000623346 1952 ntBASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD3Q7Z3D4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms