Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 AL157384.1-201ENST00000445995 2473 ntBASIC11.66□□□□□ -0.54
LCA10Q71F78 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LCA10Q71F78 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LCA10Q71F78 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC11.66□□□□□ -0.54
LCA10Q71F78 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
LCA10Q71F78 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LCA10Q71F78 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LCA10Q71F78 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
LCA10Q71F78 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC11.65□□□□□ -0.54
LCA10Q71F78 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
LCA10Q71F78 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
LCA10Q71F78 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC11.65□□□□□ -0.54
LCA10Q71F78 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC11.65□□□□□ -0.54
LCA10Q71F78 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC11.65□□□□□ -0.54
LCA10Q71F78 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LCA10Q71F78 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
LCA10Q71F78 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
LCA10Q71F78 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
LCA10Q71F78 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC11.64□□□□□ -0.55
LCA10Q71F78 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC11.64□□□□□ -0.55
LCA10Q71F78 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
LCA10Q71F78 MACF1-219ENST00000484793 834 ntTSL 2 BASIC11.64□□□□□ -0.55
LCA10Q71F78 PFN2-211ENST00000489155 636 ntTSL 4 BASIC11.64□□□□□ -0.55
LCA10Q71F78 AC016575.1-201ENST00000607026 382 ntBASIC11.64□□□□□ -0.55
LCA10Q71F78 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LCA10Q71F78 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 BID-212ENST00000614949 1988 ntTSL 5 BASIC11.64□□□□□ -0.55
LCA10Q71F78 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC11.64□□□□□ -0.55
LCA10Q71F78 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC11.64□□□□□ -0.55
LCA10Q71F78 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
LCA10Q71F78 AC004812.2-201ENST00000611079 2094 ntBASIC11.64□□□□□ -0.55
LCA10Q71F78 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC11.64□□□□□ -0.55
LCA10Q71F78 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LCA10Q71F78 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC11.64□□□□□ -0.55
LCA10Q71F78 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LCA10Q71F78 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC11.63□□□□□ -0.55
LCA10Q71F78 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC11.63□□□□□ -0.55
LCA10Q71F78 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 ABHD17AP4-201ENST00000411545 909 ntBASIC11.63□□□□□ -0.55
LCA10Q71F78 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC11.63□□□□□ -0.55
LCA10Q71F78 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC11.63□□□□□ -0.55
LCA10Q71F78 AL157400.5-201ENST00000507624 621 ntBASIC11.63□□□□□ -0.55
LCA10Q71F78 MIR3960-201ENST00000583311 91 ntBASIC11.63□□□□□ -0.55
LCA10Q71F78 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC11.63□□□□□ -0.55
LCA10Q71F78 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
LCA10Q71F78 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.63□□□□□ -0.55
LCA10Q71F78 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC11.63□□□□□ -0.55
LCA10Q71F78 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LCA10Q71F78 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms