Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
CCDC141Q6ZP82 GUSBP6-202ENST00000438529 1198 ntBASIC32.9■■■□□ 2.86
CCDC141Q6ZP82 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CCDC141Q6ZP82 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC32.9■■■□□ 2.86
CCDC141Q6ZP82 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CCDC141Q6ZP82 AC009237.3-201ENST00000393279 1427 ntBASIC32.89■■■□□ 2.86
CCDC141Q6ZP82 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC32.89■■■□□ 2.86
CCDC141Q6ZP82 MDK-213ENST00000617138 635 ntTSL 2 BASIC32.89■■■□□ 2.86
CCDC141Q6ZP82 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
CCDC141Q6ZP82 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC32.88■■■□□ 2.85
CCDC141Q6ZP82 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC32.88■■■□□ 2.85
CCDC141Q6ZP82 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC32.88■■■□□ 2.85
CCDC141Q6ZP82 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC32.88■■■□□ 2.85
CCDC141Q6ZP82 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
CCDC141Q6ZP82 PREB-202ENST00000406567 1910 ntTSL 5 BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
CCDC141Q6ZP82 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 AC142086.2-201ENST00000569753 217 ntBASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 MAZ-216ENST00000616501 991 ntTSL 5 BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 TFG-210ENST00000620299 1289 ntTSL 5 BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CCDC141Q6ZP82 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CCDC141Q6ZP82 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CCDC141Q6ZP82 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
CCDC141Q6ZP82 DUX4L16-201ENST00000555130 1264 ntBASIC32.85■■■□□ 2.85
CCDC141Q6ZP82 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
CCDC141Q6ZP82 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CCDC141Q6ZP82 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CCDC141Q6ZP82 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC32.85■■■□□ 2.85
CCDC141Q6ZP82 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
CCDC141Q6ZP82 PXK-203ENST00000383715 1756 ntTSL 5 BASIC32.84■■■□□ 2.85
CCDC141Q6ZP82 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
CCDC141Q6ZP82 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC32.84■■■□□ 2.85
CCDC141Q6ZP82 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CCDC141Q6ZP82 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CCDC141Q6ZP82 MFF-207ENST00000409565 1548 ntTSL 2 BASIC32.83■■■□□ 2.85
CCDC141Q6ZP82 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC32.83■■■□□ 2.85
CCDC141Q6ZP82 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
CCDC141Q6ZP82 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC32.83■■■□□ 2.85
CCDC141Q6ZP82 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
CCDC141Q6ZP82 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CCDC141Q6ZP82 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC32.83■■■□□ 2.85
CCDC141Q6ZP82 GPX1P1-201ENST00000388829 606 ntBASIC32.83■■■□□ 2.85
CCDC141Q6ZP82 SLC7A5P2-201ENST00000553010 536 ntBASIC32.83■■■□□ 2.85
CCDC141Q6ZP82 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CCDC141Q6ZP82 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.85
CCDC141Q6ZP82 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC32.82■■■□□ 2.84
CCDC141Q6ZP82 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC32.82■■■□□ 2.84
CCDC141Q6ZP82 MYCNOS-205ENST00000641950 531 ntBASIC32.82■■■□□ 2.84
CCDC141Q6ZP82 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC32.82■■■□□ 2.84
CCDC141Q6ZP82 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CCDC141Q6ZP82 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CCDC141Q6ZP82 AC092068.2-201ENST00000590491 1708 ntBASIC32.81■■■□□ 2.84
CCDC141Q6ZP82 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC32.81■■■□□ 2.84
CCDC141Q6ZP82 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC32.81■■■□□ 2.84
CCDC141Q6ZP82 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CCDC141Q6ZP82 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CCDC141Q6ZP82 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CCDC141Q6ZP82 AC055733.4-201ENST00000638462 1354 ntBASIC32.81■■■□□ 2.84
CCDC141Q6ZP82 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 PARP1-202ENST00000366792 553 ntTSL 3 BASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 AC231657.2-201ENST00000624556 255 ntBASIC32.8■■■□□ 2.84
CCDC141Q6ZP82 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
CCDC141Q6ZP82 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CCDC141Q6ZP82 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC32.79■■■□□ 2.84
CCDC141Q6ZP82 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC32.79■■■□□ 2.84
CCDC141Q6ZP82 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC32.79■■■□□ 2.84
CCDC141Q6ZP82 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CCDC141Q6ZP82 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC32.79■■■□□ 2.84
CCDC141Q6ZP82 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CCDC141Q6ZP82 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
CCDC141Q6ZP82 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
CCDC141Q6ZP82 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC32.78■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms