Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00575Q6W349 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LINC00575Q6W349 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
LINC00575Q6W349 AC144652.1-201ENST00000609974 1624 ntBASIC13.77□□□□□ -0.21
LINC00575Q6W349 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00575Q6W349 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00575Q6W349 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00575Q6W349 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00575Q6W349 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00575Q6W349 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00575Q6W349 AC087393.1-201ENST00000582896 145 ntBASIC13.76□□□□□ -0.21
LINC00575Q6W349 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00575Q6W349 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00575Q6W349 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00575Q6W349 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00575Q6W349 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
LINC00575Q6W349 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00575Q6W349 FEM1AP4-201ENST00000443167 1987 ntBASIC13.76□□□□□ -0.21
LINC00575Q6W349 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00575Q6W349 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00575Q6W349 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
LINC00575Q6W349 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00575Q6W349 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00575Q6W349 AC018755.3-202ENST00000596210 929 ntBASIC13.75□□□□□ -0.21
LINC00575Q6W349 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00575Q6W349 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00575Q6W349 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00575Q6W349 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00575Q6W349 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 LBH-205ENST00000407930 756 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00575Q6W349 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 LINC01960-201ENST00000563759 1884 ntBASIC13.74□□□□□ -0.21
LINC00575Q6W349 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
LINC00575Q6W349 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00575Q6W349 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00575Q6W349 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00575Q6W349 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00575Q6W349 USF2-207ENST00000595068 1612 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00575Q6W349 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00575Q6W349 AF106564.1-201ENST00000607058 2553 ntBASIC13.73□□□□□ -0.21
LINC00575Q6W349 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00575Q6W349 RPS2P35-201ENST00000443417 897 ntBASIC13.73□□□□□ -0.21
LINC00575Q6W349 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00575Q6W349 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00575Q6W349 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00575Q6W349 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00575Q6W349 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00575Q6W349 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00575Q6W349 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00575Q6W349 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00575Q6W349 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
LINC00575Q6W349 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms