Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 RAP2CP1-201ENST00000605103 478 ntBASIC19.91■□□□□ 0.78
RPUSD3Q6P087 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 OXCT2P1-201ENST00000447263 1535 ntBASIC19.9■□□□□ 0.78
RPUSD3Q6P087 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.9■□□□□ 0.78
RPUSD3Q6P087 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPUSD3Q6P087 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPUSD3Q6P087 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
RPUSD3Q6P087 HLA-L-209ENST00000420110 1011 ntBASIC19.89■□□□□ 0.77
RPUSD3Q6P087 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RPUSD3Q6P087 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.89■□□□□ 0.77
RPUSD3Q6P087 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.89■□□□□ 0.77
RPUSD3Q6P087 AC004854.2-201ENST00000608450 1441 ntBASIC19.89■□□□□ 0.77
RPUSD3Q6P087 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RPUSD3Q6P087 AC073111.5-205ENST00000641717 521 ntBASIC19.89■□□□□ 0.77
RPUSD3Q6P087 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 CDCA4P2-201ENST00000441182 718 ntBASIC19.88■□□□□ 0.77
RPUSD3Q6P087 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RPUSD3Q6P087 AL353803.4-201ENST00000565882 1934 ntBASIC19.88■□□□□ 0.77
RPUSD3Q6P087 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 KRT18P11-201ENST00000435214 1283 ntBASIC19.87■□□□□ 0.77
RPUSD3Q6P087 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 BID-214ENST00000617586 542 ntTSL 5 BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPUSD3Q6P087 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 AC026185.1-201ENST00000445748 174 ntBASIC19.86■□□□□ 0.77
RPUSD3Q6P087 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RPUSD3Q6P087 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.85■□□□□ 0.77
RPUSD3Q6P087 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPUSD3Q6P087 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.84■□□□□ 0.77
RPUSD3Q6P087 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.84■□□□□ 0.77
RPUSD3Q6P087 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.84■□□□□ 0.77
RPUSD3Q6P087 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPUSD3Q6P087 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPUSD3Q6P087 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.84■□□□□ 0.77
RPUSD3Q6P087 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RPUSD3Q6P087 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPUSD3Q6P087 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms