Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDPF1Q6NVV7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.46■□□□□ 0.23
CDPF1Q6NVV7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 AC079630.1-202ENST00000618127 1840 ntBASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 AC098818.2-201ENST00000564925 2320 ntBASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 U85056.1-201ENST00000616429 682 ntBASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDPF1Q6NVV7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDPF1Q6NVV7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 LTB4R2-202ENST00000528054 3092 ntBASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 TSPY13P-201ENST00000338964 914 ntBASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDPF1Q6NVV7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 AL033527.3-201ENST00000566366 1196 ntBASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 FZD10-202ENST00000539839 3282 ntBASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDPF1Q6NVV7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms