Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCN1P1Q5VSP4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 AL033527.3-201ENST00000566366 1196 ntBASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCN1P1Q5VSP4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LCN1P1Q5VSP4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.58■□□□□ 0.73
LCN1P1Q5VSP4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LCN1P1Q5VSP4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LCN1P1Q5VSP4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 BX664725.1-201ENST00000438252 379 ntBASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCN1P1Q5VSP4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 AC021242.3-201ENST00000607598 1377 ntBASIC19.57■□□□□ 0.72
LCN1P1Q5VSP4 AC073130.3-201ENST00000624389 2278 ntBASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LCN1P1Q5VSP4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCN1P1Q5VSP4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCN1P1Q5VSP4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms