Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 FP325331.1-202ENST00000623531 1380 ntBASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF1Q5TC12 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 AL512631.2-201ENST00000604634 923 ntBASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 AC131212.1-201ENST00000613771 668 ntBASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 C17orf82-201ENST00000623772 1530 ntBASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
ATPAF1Q5TC12 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
ATPAF1Q5TC12 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATPAF1Q5TC12 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.76■□□□□ 0.59
ATPAF1Q5TC12 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATPAF1Q5TC12 AC079630.1-202ENST00000618127 1840 ntBASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 AC144652.1-201ENST00000609974 1624 ntBASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 AC026310.3-201ENST00000625186 2373 ntBASIC18.74■□□□□ 0.59
ATPAF1Q5TC12 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms