Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 HTR7P1-202ENST00000624664 4411 ntBASIC10.88□□□□□ -0.67
LINC01554Q52M75 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01554Q52M75 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01554Q52M75 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC01554Q52M75 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01554Q52M75 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01554Q52M75 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01554Q52M75 AC139530.1-201ENST00000575312 1977 ntBASIC10.87□□□□□ -0.67
LINC01554Q52M75 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 AC087289.5-201ENST00000586076 3175 ntBASIC10.87□□□□□ -0.67
LINC01554Q52M75 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 AC104581.1-202ENST00000635932 2618 ntBASIC10.87□□□□□ -0.67
LINC01554Q52M75 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01554Q52M75 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01554Q52M75 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LINC01554Q52M75 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC01554Q52M75 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01554Q52M75 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01554Q52M75 AC138932.3-201ENST00000567634 1902 ntBASIC10.86□□□□□ -0.67
LINC01554Q52M75 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 AL139384.1-201ENST00000612143 3047 ntBASIC10.86□□□□□ -0.67
LINC01554Q52M75 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 AC007326.2-201ENST00000624224 7579 ntBASIC10.86□□□□□ -0.67
LINC01554Q52M75 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01554Q52M75 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01554Q52M75 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01554Q52M75 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01554Q52M75 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01554Q52M75 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01554Q52M75 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01554Q52M75 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01554Q52M75 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01554Q52M75 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
LINC01554Q52M75 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01554Q52M75 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01554Q52M75 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LINC01554Q52M75 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 NRG1-221ENST00000614767 762 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01554Q52M75 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
LINC01554Q52M75 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01554Q52M75 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01554Q52M75 GALC-202ENST00000393568 2054 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01554Q52M75 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms