Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CERKLQ49MI3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.6■■□□□ 1.69
CERKLQ49MI3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CERKLQ49MI3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CERKLQ49MI3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CERKLQ49MI3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.6■■□□□ 1.69
CERKLQ49MI3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
CERKLQ49MI3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CERKLQ49MI3 LINC01960-201ENST00000563759 1884 ntBASIC25.6■■□□□ 1.69
CERKLQ49MI3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CERKLQ49MI3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CERKLQ49MI3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CERKLQ49MI3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CERKLQ49MI3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CERKLQ49MI3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CERKLQ49MI3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
CERKLQ49MI3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CERKLQ49MI3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.59■■□□□ 1.69
CERKLQ49MI3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.59■■□□□ 1.69
CERKLQ49MI3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.59■■□□□ 1.69
CERKLQ49MI3 AC137761.2-201ENST00000561729 223 ntBASIC25.59■■□□□ 1.69
CERKLQ49MI3 AC145350.3-201ENST00000569033 163 ntBASIC25.59■■□□□ 1.69
CERKLQ49MI3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CERKLQ49MI3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CERKLQ49MI3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CERKLQ49MI3 AC006015.1-201ENST00000429970 570 ntBASIC25.58■■□□□ 1.69
CERKLQ49MI3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CERKLQ49MI3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.58■■□□□ 1.69
CERKLQ49MI3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.58■■□□□ 1.69
CERKLQ49MI3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.58■■□□□ 1.69
CERKLQ49MI3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CERKLQ49MI3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CERKLQ49MI3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CERKLQ49MI3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CERKLQ49MI3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.57■■□□□ 1.68
CERKLQ49MI3 AC016769.1-201ENST00000409132 1010 ntBASIC25.57■■□□□ 1.68
CERKLQ49MI3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.57■■□□□ 1.68
CERKLQ49MI3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.57■■□□□ 1.68
CERKLQ49MI3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.57■■□□□ 1.68
CERKLQ49MI3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.57■■□□□ 1.68
CERKLQ49MI3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CERKLQ49MI3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CERKLQ49MI3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CERKLQ49MI3 AC079140.4-201ENST00000507448 529 ntBASIC25.56■■□□□ 1.68
CERKLQ49MI3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.56■■□□□ 1.68
CERKLQ49MI3 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.56■■□□□ 1.68
CERKLQ49MI3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CERKLQ49MI3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.56■■□□□ 1.68
CERKLQ49MI3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
CERKLQ49MI3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CERKLQ49MI3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CERKLQ49MI3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CERKLQ49MI3 KRT19P1-201ENST00000405746 1186 ntBASIC25.55■■□□□ 1.68
CERKLQ49MI3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CERKLQ49MI3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.55■■□□□ 1.68
CERKLQ49MI3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.55■■□□□ 1.68
CERKLQ49MI3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CERKLQ49MI3 AC005224.4-201ENST00000583262 1652 ntBASIC25.55■■□□□ 1.68
CERKLQ49MI3 AC009237.3-201ENST00000393279 1427 ntBASIC25.54■■□□□ 1.68
CERKLQ49MI3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CERKLQ49MI3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CERKLQ49MI3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CERKLQ49MI3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CERKLQ49MI3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CERKLQ49MI3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.54■■□□□ 1.68
CERKLQ49MI3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CERKLQ49MI3 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.54■■□□□ 1.68
CERKLQ49MI3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.54■■□□□ 1.68
CERKLQ49MI3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.54■■□□□ 1.68
CERKLQ49MI3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.54■■□□□ 1.68
CERKLQ49MI3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CERKLQ49MI3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.54■■□□□ 1.68
CERKLQ49MI3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CERKLQ49MI3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CERKLQ49MI3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CERKLQ49MI3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
CERKLQ49MI3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CERKLQ49MI3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.53■■□□□ 1.68
CERKLQ49MI3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.53■■□□□ 1.68
CERKLQ49MI3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CERKLQ49MI3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CERKLQ49MI3 AC079089.2-201ENST00000531211 1277 ntBASIC25.53■■□□□ 1.68
CERKLQ49MI3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.53■■□□□ 1.68
CERKLQ49MI3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CERKLQ49MI3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CERKLQ49MI3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CERKLQ49MI3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CERKLQ49MI3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.52■■□□□ 1.68
CERKLQ49MI3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CERKLQ49MI3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.52■■□□□ 1.68
CERKLQ49MI3 AC080038.1-201ENST00000611274 1154 ntBASIC25.52■■□□□ 1.68
CERKLQ49MI3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CERKLQ49MI3 AC093323.1-202ENST00000635031 2045 ntBASIC25.52■■□□□ 1.68
CERKLQ49MI3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CERKLQ49MI3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CERKLQ49MI3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.68
CERKLQ49MI3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
CERKLQ49MI3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CERKLQ49MI3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.51■■□□□ 1.67
CERKLQ49MI3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms