Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
USH1GQ495M9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.06■■□□□ 1.6
USH1GQ495M9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
USH1GQ495M9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
USH1GQ495M9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.06■■□□□ 1.6
USH1GQ495M9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
USH1GQ495M9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
USH1GQ495M9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.06■■□□□ 1.6
USH1GQ495M9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USH1GQ495M9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USH1GQ495M9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USH1GQ495M9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
USH1GQ495M9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USH1GQ495M9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
USH1GQ495M9 TPRG1LP1-201ENST00000598702 760 ntBASIC25.05■■□□□ 1.6
USH1GQ495M9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USH1GQ495M9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
USH1GQ495M9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.04■■□□□ 1.6
USH1GQ495M9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.04■■□□□ 1.6
USH1GQ495M9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
USH1GQ495M9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
USH1GQ495M9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
USH1GQ495M9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
USH1GQ495M9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.04■■□□□ 1.6
USH1GQ495M9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.04■■□□□ 1.6
USH1GQ495M9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
USH1GQ495M9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
USH1GQ495M9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USH1GQ495M9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.03■■□□□ 1.6
USH1GQ495M9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USH1GQ495M9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
USH1GQ495M9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
USH1GQ495M9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
USH1GQ495M9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.03■■□□□ 1.6
USH1GQ495M9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USH1GQ495M9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.03■■□□□ 1.6
USH1GQ495M9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
USH1GQ495M9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
USH1GQ495M9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
USH1GQ495M9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
USH1GQ495M9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
USH1GQ495M9 NTF6G-201ENST00000591094 616 ntBASIC25.02■■□□□ 1.6
USH1GQ495M9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
USH1GQ495M9 IKBKGP1-201ENST00000612193 1073 ntBASIC25.02■■□□□ 1.6
USH1GQ495M9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.02■■□□□ 1.6
USH1GQ495M9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
USH1GQ495M9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
USH1GQ495M9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
USH1GQ495M9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
USH1GQ495M9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
USH1GQ495M9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USH1GQ495M9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USH1GQ495M9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USH1GQ495M9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
USH1GQ495M9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
USH1GQ495M9 AC022517.1-201ENST00000592429 346 ntBASIC25.01■■□□□ 1.59
USH1GQ495M9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.01■■□□□ 1.59
USH1GQ495M9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
USH1GQ495M9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
USH1GQ495M9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USH1GQ495M9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USH1GQ495M9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
USH1GQ495M9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
USH1GQ495M9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USH1GQ495M9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
USH1GQ495M9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25■■□□□ 1.59
USH1GQ495M9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25■■□□□ 1.59
USH1GQ495M9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25■■□□□ 1.59
USH1GQ495M9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
USH1GQ495M9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25■■□□□ 1.59
USH1GQ495M9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25■■□□□ 1.59
USH1GQ495M9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25■■□□□ 1.59
USH1GQ495M9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25■■□□□ 1.59
USH1GQ495M9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25■■□□□ 1.59
USH1GQ495M9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25■■□□□ 1.59
USH1GQ495M9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
USH1GQ495M9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25■■□□□ 1.59
USH1GQ495M9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
USH1GQ495M9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
USH1GQ495M9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.99■■□□□ 1.59
USH1GQ495M9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
USH1GQ495M9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.99■■□□□ 1.59
USH1GQ495M9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.99■■□□□ 1.59
USH1GQ495M9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
USH1GQ495M9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
USH1GQ495M9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
USH1GQ495M9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
USH1GQ495M9 DUSP8P5-201ENST00000422884 1815 ntBASIC24.98■■□□□ 1.59
USH1GQ495M9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
USH1GQ495M9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.98■■□□□ 1.59
USH1GQ495M9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
USH1GQ495M9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.97■■□□□ 1.59
USH1GQ495M9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.97■■□□□ 1.59
USH1GQ495M9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
USH1GQ495M9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
USH1GQ495M9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
USH1GQ495M9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
USH1GQ495M9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
USH1GQ495M9 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.97■■□□□ 1.59
USH1GQ495M9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms