Protein–RNA interactions for Protein: Q2QD12

RPEL1, Ribulose-phosphate 3-epimerase-like protein 1, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPEL1Q2QD12 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPEL1Q2QD12 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPEL1Q2QD12 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 AC242852.2-201ENST00000615738 1807 ntBASIC17.28■□□□□ 0.36
RPEL1Q2QD12 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 AC092171.4-201ENST00000609130 632 ntBASIC17.28■□□□□ 0.36
RPEL1Q2QD12 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPEL1Q2QD12 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPEL1Q2QD12 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.27■□□□□ 0.36
RPEL1Q2QD12 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.27■□□□□ 0.36
RPEL1Q2QD12 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPEL1Q2QD12 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPEL1Q2QD12 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPEL1Q2QD12 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.27■□□□□ 0.36
RPEL1Q2QD12 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.27■□□□□ 0.36
RPEL1Q2QD12 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.27■□□□□ 0.36
RPEL1Q2QD12 MIR4466-201ENST00000606121 54 ntBASIC17.27■□□□□ 0.36
RPEL1Q2QD12 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.27■□□□□ 0.36
RPEL1Q2QD12 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.27■□□□□ 0.36
RPEL1Q2QD12 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPEL1Q2QD12 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.27■□□□□ 0.35
RPEL1Q2QD12 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 C17orf82-201ENST00000623772 1530 ntBASIC17.26■□□□□ 0.35
RPEL1Q2QD12 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPEL1Q2QD12 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 AC241377.3-202ENST00000626088 1088 ntBASIC17.25■□□□□ 0.35
RPEL1Q2QD12 AC241585.3-202ENST00000628937 1088 ntBASIC17.25■□□□□ 0.35
RPEL1Q2QD12 AC245100.8-202ENST00000629247 1058 ntBASIC17.25■□□□□ 0.35
RPEL1Q2QD12 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPEL1Q2QD12 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPEL1Q2QD12 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.23■□□□□ 0.35
RPEL1Q2QD12 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPEL1Q2QD12 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPEL1Q2QD12 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.23■□□□□ 0.35
RPEL1Q2QD12 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.23■□□□□ 0.35
RPEL1Q2QD12 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPEL1Q2QD12 AC144652.1-201ENST00000609974 1624 ntBASIC17.23■□□□□ 0.35
RPEL1Q2QD12 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.23■□□□□ 0.35
RPEL1Q2QD12 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.23■□□□□ 0.35
RPEL1Q2QD12 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPEL1Q2QD12 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPEL1Q2QD12 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPEL1Q2QD12 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms